Regulon of FabR in Vibrio parahaemolyticus RIMD 2210633
| Regulator type: | Transcription factor |
| TF locus tag: | VP2941 |
| Regulator family: | TetR |
| Regulation mode: | repressor |
| Biological process: | Fatty acid biosynthesis |
| Effector: | Unsaturated acyl-ACP; Unsaturated acyl-CoA |
| Regulog: | FabR - Vibrionales |
| Statistics of regulated genes: | |
| - Genes | 6 |
| - Operons | 6 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By trascription factor - FabR
- By taxonomy - Vibrionales
- By TF family - TetR
- By effector - Unsaturated acyl-ACP
- By effector - Unsaturated acyl-CoA
- By pathway - Fatty acid biosynthesis
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -99
Score: 4.5 Sequence: AGGATACATGTGTTCGCC
Locus tag: VPA0603
Name: COG2030 Funciton: Putative acyl dehydratase, COG2030 |
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COG2030
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Putative acyl dehydratase, COG2030
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Position: -183
Score: 4.8 Sequence: ACCTCACAGGTGTTCGCT
Locus tag: VP2213
Name: fadL Funciton: Long-chain fatty acid transport protein |
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fadL
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Long-chain fatty acid transport protein
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Position: -52
Score: 5.7 Sequence: AGCGTACACGTGTTCACT
Locus tag: VP1591
Name: fabA Funciton: 3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.60) |
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fabA
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3-hydroxydecanoyl-[acyl-carrier-protein] dehydratase (EC 4.2.1.60)
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Position: -65
Score: 6.3 Sequence: AGCTTACACGTGTACGCT
Locus tag: VP3048
Name: hyIII Funciton: COG1272: Predicted membrane protein hemolysin III homolog |
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hyIII
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COG1272: Predicted membrane protein hemolysin III homolog
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Position: -58
Score: 4.8 Sequence: TGAGTACACTTGTTCGCT
Position: -35
Score: 5 Sequence: AGCTTACGCCTGTAAGCC
Locus tag: VP0351
Name: lcfH Funciton: putative long-chain-fatty-acid--CoA ligase (EC 6.2.1.3) |
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lcfH
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putative long-chain-fatty-acid--CoA ligase (EC 6.2.1.3)
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Position: -63
Score: 5.5 Sequence: GACTTACACGTGTTCGCT
Position: -37
Score: 5.4 Sequence: AGCGAACAGTTGTTAGCT
Locus tag: VPA0707
Name: OLE1 Funciton: Fatty acid desaturase (EC 1.14.19.1) |
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OLE1
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Fatty acid desaturase (EC 1.14.19.1)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |