Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of PdhR in Escherichia coli str. K-12 substr. MG1655

Properties
Regulator type: Transcription factor
TF locus tag: b0113
Regulator family: GntR/Others
Regulation mode: repressor
Biological process: Pyruvate metabolism
Effector: Pyruvate
Regulog: PdhR - Enterobacteriales
Statistics of regulated genes:
- Genes 17
- Operons 6
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 44 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -238
Score: 4
Sequence: TGCACAGGTAGGACCAATTTT
Position: -121
Score: 3.9
Sequence: AAAAATGGTCTGACCGGTAGC
Locus tag: b2979
Name: glcD
Funciton: Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD
Locus tag: b4468
Name: glcE
Funciton: Glycolate dehydrogenase (EC 1.1.99.14), FAD-binding subunit GlcE
Locus tag: b4467
Name: glcF
Funciton: Glycolate dehydrogenase (EC 1.1.99.14), iron-sulfur subunit GlcF
Locus tag: b2977
Name: glcG
Funciton: Hypothetical protein GlcG in glycolate utilization operon
Locus tag: b2976
Name: glcB
Funciton: Malate synthase G (EC 2.3.3.9)
b2979
glcD
Glycolate dehydrogenase (EC 1.1.99.14), subunit GlcD
b4468
glcE
Glycolate dehydrogenase (EC 1.1.99.14), FAD-binding subunit GlcE
b4467
glcF
Glycolate dehydrogenase (EC 1.1.99.14), iron-sulfur subunit GlcF
b2977
glcG
Hypothetical protein GlcG in glycolate utilization operon
b2976
glcB
Malate synthase G (EC 2.3.3.9)
Position: -214
Score: 3.7
Sequence: CTTATTGGTCATACAAATAAG
Locus tag: b0154
Name: hemL
Funciton: Glutamate-1-semialdehyde aminotransferase (EC 5.4.3.8)
b0154
hemL
Glutamate-1-semialdehyde aminotransferase (EC 5.4.3.8)
Position: -68
Score: 5.7
Sequence: AACAATGGTTTTACCAATTGG
Locus tag: b2579
Name: yfiD
Funciton: stress-induced alternate pyruvate formate-lyase subunit
b2579
yfiD
stress-induced alternate pyruvate formate-lyase subunit
Position: -138
Score: 6.4
Sequence: AATTTTGGTATGACCAATGCA
Locus tag: b1109
Name: ndh
Funciton: NADH dehydrogenase
b1109
ndh
NADH dehydrogenase
Position: -230
Score: 5.7
Sequence: CACATTGGTTATACCAATTGC
Locus tag: b0432
Name: cyoA
Funciton: cytochrome o ubiquinol oxidase subunit II
Locus tag: b0431
Name: cyoB
Funciton: cytochrome o ubiquinol oxidase subunit I
Locus tag: b0430
Name: cyoC
Funciton: cytochrome o ubiquinol oxidase subunit III
Locus tag: b0429
Name: cyoD
Funciton: cytochrome o ubiquinol oxidase subunit IV
Locus tag: b0428
Name: cyoE
Funciton: protoheme IX farnesyltransferase
b0432
cyoA
cytochrome o ubiquinol oxidase subunit II
b0431
cyoB
cytochrome o ubiquinol oxidase subunit I
b0430
cyoC
cytochrome o ubiquinol oxidase subunit III
b0429
cyoD
cytochrome o ubiquinol oxidase subunit IV
b0428
cyoE
protoheme IX farnesyltransferase
Position: -50
Score: 6.7
Sequence: GAAATTGGTAAGACCAATTGA
Locus tag: b0113
Name: pdhR
Funciton: Transcriptional repressor for pyruvate dehydrogenase complex, GntR family
Locus tag: b0114
Name: aceE
Funciton: Pyruvate dehydrogenase E1 component (EC 1.2.4.1)
Locus tag: b0115
Name: aceF
Funciton: Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12)
Locus tag: b0116
Name: lpdA
Funciton: Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4) @ Dihydrolipoamide dehydrogenase (EC 1.8.1.4)
b0113
pdhR
Transcriptional repressor for pyruvate dehydrogenase complex, GntR family
b0114
aceE
Pyruvate dehydrogenase E1 component (EC 1.2.4.1)
b0115
aceF
Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12)
b0116
lpdA
Dihydrolipoamide dehydrogenase of pyruvate dehydrogenase complex (EC 1.8.1.4) @ Dihydrolipoamide dehydrogenase (EC 1.8.1.4)
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