Regulon of PdhR in Citrobacter koseri ATCC BAA-895
| Regulator type: | Transcription factor |
| TF locus tag: | CKO_03260 |
| Regulator family: | GntR/Others |
| Regulation mode: | repressor |
| Biological process: | Pyruvate metabolism |
| Effector: | Pyruvate |
| Regulog: | PdhR - Enterobacteriales |
| Statistics of regulated genes: | |
| - Genes | 11 |
| - Operons | 5 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Enterobacteriales
- By trascription factor - PdhR
- By TF family - GntR/Others
- By effector - Pyruvate
- By pathway - Pyruvate metabolism
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -382
Score: 4.8 Sequence: TTAATTGGTAATACAAATACA
Locus tag: CKO_03214
Name: hemL Funciton: Glutamate-1-semialdehyde aminotransferase (EC 5.4.3.8) |
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hemL
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Glutamate-1-semialdehyde aminotransferase (EC 5.4.3.8)
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Position: -70
Score: 5.7 Sequence: AACAATGGTTTTACCAATTGG
Locus tag: CKO_00205
Name: null Funciton: stress-induced alternate pyruvate formate-lyase subunit |
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stress-induced alternate pyruvate formate-lyase subunit
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Position: -230
Score: 5.7 Sequence: TACATTGGTTATACCAATTAC
Locus tag: CKO_02729
Name: null Funciton: cytochrome o ubiquinol oxidase subunit II
Locus tag: CKO_02730
Name: null Funciton: cytochrome o ubiquinol oxidase subunit I
Locus tag: CKO_02731
Name: null Funciton: cytochrome o ubiquinol oxidase subunit III
Locus tag: CKO_02732
Name: null Funciton: cytochrome o ubiquinol oxidase subunit IV
Locus tag: CKO_02733
Name: null Funciton: protoheme IX farnesyltransferase |
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cytochrome o ubiquinol oxidase subunit II
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cytochrome o ubiquinol oxidase subunit I
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cytochrome o ubiquinol oxidase subunit III
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cytochrome o ubiquinol oxidase subunit IV
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protoheme IX farnesyltransferase
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Position: -151
Score: 6.4 Sequence: AATTTTGGTATGACCAATGCA
Locus tag: CKO_01946
Name: null Funciton: NADH dehydrogenase |
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NADH dehydrogenase
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Position: -51
Score: 6.7 Sequence: GAAATTGGTAAGACCAATTGA
Locus tag: CKO_03260
Name: pdhR Funciton: Transcriptional repressor for pyruvate dehydrogenase complex, GntR family
Locus tag: CKO_03259
Name: aceE Funciton: Pyruvate dehydrogenase E1 component (EC 1.2.4.1)
Locus tag: CKO_03258
Name: aceF Funciton: Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12) |
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pdhR
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Transcriptional repressor for pyruvate dehydrogenase complex, GntR family
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aceE
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Pyruvate dehydrogenase E1 component (EC 1.2.4.1)
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aceF
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Dihydrolipoamide acetyltransferase component of pyruvate dehydrogenase complex (EC 2.3.1.12)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |