Regulon of MetR in Edwardsiella tarda EIB202

Properties
Regulator type:	Transcription factor
TF locus tag:	frameshift
Regulator family:	LysR
Regulation mode:	repressor (activator)
Biological process:	Methionine biosynthesis
Effector:	Homocysteine
Regulog:	MetR - Enterobacteriales
Statistics of regulated genes:
- Genes	5
- Operons	5
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 140 sites [see more]

Member of regulog collections

By taxonomy - Enterobacteriales
By trascription factor - MetR
By TF family - LysR
By effector - Homocysteine
By pathway - Methionine biosynthesis

Regulated operons
	Locus Tag	Name	Function
Position: -161 Score: 3.8 Sequence: CTGACGCTTTCTCAT Position: -140 Score: 3.8 Sequence: CTGACGTTTCTTCAT Position: 0 Score: 4.6 Sequence: ATGAGTTTTTTTCAC Locus tag: ETAE_3485 Name: metF Funciton: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)
	ETAE_3485	metF	5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)
Position: -89 Score: 4.2 Sequence: ATGCGCGTCTTTCAT Locus tag: ETAE_2854 Name: luxS Funciton: S-ribosylhomocysteine lyase (EC 4.4.1.21) / Autoinducer-2 production protein LuxS
	ETAE_2854	luxS	S-ribosylhomocysteine lyase (EC 4.4.1.21) / Autoinducer-2 production protein LuxS
Position: -138 Score: 4.4 Sequence: ATGAAAAAGCCTCAA Locus tag: ETAE_0200 Name: metH Funciton: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13)
	ETAE_0200	metH	5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13)
Position: -113 Score: 4.8 Sequence: ATGAAAATTTCTCAA Locus tag: ETAE_3190 Name: metA Funciton: Homoserine O-succinyltransferase (EC 2.3.1.46)
	ETAE_3190	metA	Homoserine O-succinyltransferase (EC 2.3.1.46)
Position: -125 Score: 4.5 Sequence: ATGAGAAACCCTCAG Locus tag: ETAE_0142 Name: metE Funciton: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)
	ETAE_0142	metE	5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD