Regulon of MetR in Salmonella typhimurium LT2

Properties
Regulator type:	Transcription factor
TF locus tag:	STM3964
Regulator family:	LysR
Regulation mode:	repressor (activator)
Biological process:	Methionine biosynthesis
Effector:	Homocysteine
Regulog:	MetR - Enterobacteriales
Statistics of regulated genes:
- Genes	8
- Operons	8
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 140 sites [see more]

Member of regulog collections

By taxonomy - Enterobacteriales
By trascription factor - MetR
By TF family - LysR
By effector - Homocysteine
By pathway - Methionine biosynthesis

Regulated operons
	Locus Tag	Name	Function
Position: -13 Score: 4.9 Sequence: GTGAAGGACTTTCAT Locus tag: STM3964 Name: metR Funciton: Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family
	STM3964	metR	Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family
Position: -250 Score: 4.9 Sequence: ATGAAAGTCCTTCAC Locus tag: STM3965 Name: metE Funciton: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)
	STM3965	metE	5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)
Position: -215 Score: 4.6 Sequence: GTGAAAAATCTGCAT Locus tag: STM2555 Name: glyA Funciton: Serine hydroxymethyltransferase (EC 2.1.2.1)
	STM2555	glyA	Serine hydroxymethyltransferase (EC 2.1.2.1)
Position: -80 Score: 4.2 Sequence: ATGCGCGTCTTTCAT Locus tag: STM2817 Name: luxS Funciton: S-ribosylhomocysteine lyase (EC 4.4.1.21) / Autoinducer-2 production protein LuxS
	STM2817	luxS	S-ribosylhomocysteine lyase (EC 4.4.1.21) / Autoinducer-2 production protein LuxS
Position: -124 Score: 4.6 Sequence: ATGCAGATTTTTCAC Locus tag: STM2556 Name: hmp Funciton: Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17)
	STM2556	hmp	Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17)
Position: -156 Score: 4.3 Sequence: ATGAAGAAAATTCAA Position: -136 Score: 4.4 Sequence: CTGAATATTCCTCAT Position: 0 Score: 4.6 Sequence: ATGAGCTTTTTTCAC Locus tag: STM4105 Name: metF Funciton: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)
	STM4105	metF	5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)
Position: -111 Score: 4.8 Sequence: GTGAAACTTTCTCAC Locus tag: STM4182 Name: metA Funciton: Homoserine O-succinyltransferase (EC 2.3.1.46)
	STM4182	metA	Homoserine O-succinyltransferase (EC 2.3.1.46)
Position: -93 Score: 4.3 Sequence: CTGAACATGTCTCAT Locus tag: STM4188.S Name: metH Funciton: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13)
	STM4188.S	metH	5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD