Regulon of MetR in Salmonella typhimurium LT2
| Regulator type: | Transcription factor |
| TF locus tag: | STM3964 |
| Regulator family: | LysR |
| Regulation mode: | repressor (activator) |
| Biological process: | Methionine biosynthesis |
| Effector: | Homocysteine |
| Regulog: | MetR - Enterobacteriales |
| Statistics of regulated genes: | |
| - Genes | 8 |
| - Operons | 8 |
| Visualization: | |
|
Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Enterobacteriales
- By trascription factor - MetR
- By TF family - LysR
- By effector - Homocysteine
- By pathway - Methionine biosynthesis
| Locus Tag | Name | Function | |
|---|---|---|---|
|
Position: -13
Score: 4.9 Sequence: GTGAAGGACTTTCAT
Locus tag: STM3964
Name: metR Funciton: Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family |
|||
|
metR
|
Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family
|
||
|
Position: -250
Score: 4.9 Sequence: ATGAAAGTCCTTCAC
Locus tag: STM3965
Name: metE Funciton: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) |
|||
|
metE
|
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)
|
||
|
Position: -215
Score: 4.6 Sequence: GTGAAAAATCTGCAT
Locus tag: STM2555
Name: glyA Funciton: Serine hydroxymethyltransferase (EC 2.1.2.1) |
|||
|
glyA
|
Serine hydroxymethyltransferase (EC 2.1.2.1)
|
||
|
Position: -80
Score: 4.2 Sequence: ATGCGCGTCTTTCAT
Locus tag: STM2817
Name: luxS Funciton: S-ribosylhomocysteine lyase (EC 4.4.1.21) / Autoinducer-2 production protein LuxS |
|||
|
luxS
|
S-ribosylhomocysteine lyase (EC 4.4.1.21) / Autoinducer-2 production protein LuxS
|
||
|
Position: -124
Score: 4.6 Sequence: ATGCAGATTTTTCAC
Locus tag: STM2556
Name: hmp Funciton: Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17) |
|||
|
hmp
|
Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17)
|
||
|
Position: -156
Score: 4.3 Sequence: ATGAAGAAAATTCAA
Position: -136
Score: 4.4 Sequence: CTGAATATTCCTCAT
Position: 0
Score: 4.6 Sequence: ATGAGCTTTTTTCAC
Locus tag: STM4105
Name: metF Funciton: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) |
|||
|
metF
|
5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)
|
||
|
Position: -111
Score: 4.8 Sequence: GTGAAACTTTCTCAC
Locus tag: STM4182
Name: metA Funciton: Homoserine O-succinyltransferase (EC 2.3.1.46) |
|||
|
metA
|
Homoserine O-succinyltransferase (EC 2.3.1.46)
|
||
|
Position: -93
Score: 4.3 Sequence: CTGAACATGTCTCAT
Locus tag: STM4188.S
Name: metH Funciton: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) |
|||
|
metH
|
5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13)
|
||
|
Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |