Regulon of MetR in Serratia proteamaculans 568
| Regulator type: | Transcription factor |
| TF locus tag: | Spro_0241 |
| Regulator family: | LysR |
| Regulation mode: | repressor (activator) |
| Biological process: | Methionine biosynthesis |
| Effector: | Homocysteine |
| Regulog: | MetR - Enterobacteriales |
| Statistics of regulated genes: | |
| - Genes | 11 |
| - Operons | 10 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Enterobacteriales
- By trascription factor - MetR
- By TF family - LysR
- By effector - Homocysteine
- By pathway - Methionine biosynthesis
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -161
Score: 4.2 Sequence: GTGAAATTCTTTCTC
Position: -139
Score: 3.8 Sequence: GTGAGGATTAATCAT
Position: 0
Score: 4.6 Sequence: ATGAGTTTTTTTCAC
Locus tag: Spro_4784
Name: metF Funciton: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20) |
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metF
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5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)
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Position: -174
Score: 4.2 Sequence: CTGAGCTTTTTTCAG
Position: -13
Score: 4.7 Sequence: GTGAAGGACTCTCAT
Locus tag: Spro_0241
Name: metR Funciton: Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family |
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metR
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Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family
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Position: -101
Score: 4.1 Sequence: ATGCGCGTCTTTCAC
Locus tag: Spro_0848
Name: luxS Funciton: S-ribosylhomocysteine lyase (EC 4.4.1.21) / Autoinducer-2 production protein LuxS |
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luxS
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S-ribosylhomocysteine lyase (EC 4.4.1.21) / Autoinducer-2 production protein LuxS
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Position: -166
Score: 4.5 Sequence: CTGAAAAACTCTCAA
Locus tag: Spro_4490
Name: metH Funciton: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13) |
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metH
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5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13)
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Position: -169
Score: 4.4 Sequence: ATGCGGTTTTTTCAT
Locus tag: Spro_3639
Name: hmp Funciton: Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17) |
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hmp
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Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17)
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Position: -218
Score: 4.4 Sequence: ATGAAAAAACCGCAT
Locus tag: Spro_3638
Name: glyA Funciton: Serine hydroxymethyltransferase (EC 2.1.2.1) |
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glyA
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Serine hydroxymethyltransferase (EC 2.1.2.1)
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Position: -108
Score: 5 Sequence: ATGAAACATTTTCAC
Locus tag: Spro_4504
Name: metA Funciton: Homoserine O-succinyltransferase (EC 2.3.1.46) |
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metA
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Homoserine O-succinyltransferase (EC 2.3.1.46)
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Position: -107
Score: 4.7 Sequence: ATGAGAGTCCTTCAC
Locus tag: Spro_0242
Name: metE Funciton: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14) |
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metE
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5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)
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Position: -177
Score: 4.5 Sequence: ATGAATTTCTCTCAC
Position: -157
Score: 4.1 Sequence: ATGAAAATTCTTCTA
Locus tag: Spro_1044
Name: metE2 Funciton: Methionine synthase II, vitamin-B12 independent (EC 2.1.1.14) |
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metE2
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Methionine synthase II, vitamin-B12 independent (EC 2.1.1.14)
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Position: -183
Score: 4.4 Sequence: ATGAATATGCCTCAT
Locus tag: Spro_3175
Name: PF08908 Funciton: Protein of unknown function DUF1852
Locus tag: Spro_3176
Name: metE2-2 Funciton: Methionine synthase II, vitamin-B12 independent (EC 2.1.1.14) |
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PF08908
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Protein of unknown function DUF1852
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metE2-2
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Methionine synthase II, vitamin-B12 independent (EC 2.1.1.14)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |