Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of MetR in Yersinia pestis KIM

Properties
Regulator type: Transcription factor
TF locus tag: y0441
Regulator family: LysR
Regulation mode: repressor (activator)
Biological process: Methionine biosynthesis
Effector: Homocysteine
Regulog: MetR - Enterobacteriales
Statistics of regulated genes:
- Genes 7
- Operons 7
Visualization:
Allows to visualize regulon content in the context of metabolic pathways
Built upon 140 sites [see more]
Member of regulog collections
Regulated operons
Locus Tag Name Function

Position: -172
Score: 3.6
Sequence: ATATGAATTTTTCAC
Position: -148
Score: 3.8
Sequence: GTGAATATTAATCAT
Position: 0
Score: 4.6
Sequence: ATGAGTTTTTTTCAC
Locus tag: y0304
Name: metF
Funciton: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)
metF
5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)

Position: -13
Score: 4.7
Sequence: GTGAAGGACTCTCAT
Locus tag: y0441
Name: metR
Funciton: Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family
metR
Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family

Position: -103
Score: 4.1
Sequence: ATGCGCGTCTTTCAC
Locus tag: y0888
Name: luxS
Funciton: S-ribosylhomocysteine lyase (EC 4.4.1.21) / Autoinducer-2 production protein LuxS
luxS
S-ribosylhomocysteine lyase (EC 4.4.1.21) / Autoinducer-2 production protein LuxS

Position: -116
Score: 4.3
Sequence: CTGAAAAAGTCTCAA
Locus tag: y0020
Name: metH
Funciton: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13)
metH
5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13)

Position: -149
Score: 4.5
Sequence: ATGTGAATTTTTCAT
Locus tag: y1321
Name: hmp
Funciton: Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17)
hmp
Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17)

Position: -109
Score: 4.8
Sequence: ATGAAACATTTTCAG
Locus tag: y0013
Name: metA
Funciton: Homoserine O-succinyltransferase (EC 2.3.1.46)
metA
Homoserine O-succinyltransferase (EC 2.3.1.46)

Position: -92
Score: 4.7
Sequence: ATGAGAGTCCTTCAC
Locus tag: y0442
Name: metE
Funciton: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)
metE
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD