Regulon of MetR in Yersinia pestis KIM

Properties
Regulator type:	Transcription factor
TF locus tag:	y0441
Regulator family:	LysR
Regulation mode:	repressor (activator)
Biological process:	Methionine biosynthesis
Effector:	Homocysteine
Regulog:	MetR - Enterobacteriales
Statistics of regulated genes:
- Genes	7
- Operons	7
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 140 sites [see more]

Member of regulog collections

By taxonomy - Enterobacteriales
By trascription factor - MetR
By TF family - LysR
By effector - Homocysteine
By pathway - Methionine biosynthesis

Regulated operons
	Locus Tag	Name	Function
Position: -172 Score: 3.6 Sequence: ATATGAATTTTTCAC Position: -148 Score: 3.8 Sequence: GTGAATATTAATCAT Position: 0 Score: 4.6 Sequence: ATGAGTTTTTTTCAC Locus tag: y0304 Name: metF Funciton: 5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)
	y0304	metF	5,10-methylenetetrahydrofolate reductase (EC 1.5.1.20)
Position: -13 Score: 4.7 Sequence: GTGAAGGACTCTCAT Locus tag: y0441 Name: metR Funciton: Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family
	y0441	metR	Homocysteine-responsive transcriptional regulator of methionine metabolism, LysR family
Position: -103 Score: 4.1 Sequence: ATGCGCGTCTTTCAC Locus tag: y0888 Name: luxS Funciton: S-ribosylhomocysteine lyase (EC 4.4.1.21) / Autoinducer-2 production protein LuxS
	y0888	luxS	S-ribosylhomocysteine lyase (EC 4.4.1.21) / Autoinducer-2 production protein LuxS
Position: -116 Score: 4.3 Sequence: CTGAAAAAGTCTCAA Locus tag: y0020 Name: metH Funciton: 5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13)
	y0020	metH	5-methyltetrahydrofolate--homocysteine methyltransferase (EC 2.1.1.13)
Position: -149 Score: 4.5 Sequence: ATGTGAATTTTTCAT Locus tag: y1321 Name: hmp Funciton: Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17)
	y1321	hmp	Flavohemoprotein (Hemoglobin-like protein) (Flavohemoglobin) (Nitric oxide dioxygenase) (EC 1.14.12.17)
Position: -109 Score: 4.8 Sequence: ATGAAACATTTTCAG Locus tag: y0013 Name: metA Funciton: Homoserine O-succinyltransferase (EC 2.3.1.46)
	y0013	metA	Homoserine O-succinyltransferase (EC 2.3.1.46)
Position: -92 Score: 4.7 Sequence: ATGAGAGTCCTTCAC Locus tag: y0442 Name: metE Funciton: 5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)
	y0442	metE	5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase (EC 2.1.1.14)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD