Regulog ScrR - Staphylococcaceae
| Regulator type: | Transcription factor |
| Regulator family: | LacI |
| Regulation mode: | repressor |
| Biological process: | Sucrose utilization |
| Effector: | Sucrose-6-phosphate |
| Phylum: | Firmicutes |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Staphylococcaceae
- By TF family - LacI
- By effector - Sucrose-6-phosphate
- By pathway - Sucrose utilization
| Genome | Genes | Operons |
|---|---|---|
| Staphylococcus aureus subsp. aureus N315 | 3 | 2 |
| Staphylococcus capitis SK14 | 3 | 2 |
| Staphylococcus epidermidis ATCC 12228 | 3 | 2 |
| Staphylococcus carnosus subsp. carnosus TM300 | ||
| Staphylococcus haemolyticus JCSC1435 | 3 | 2 |
| Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 | 3 | 2 |
| Macrococcus caseolyticus JCSC5402 | 3 | 1 |
| Genes | Function | |||||||
|---|---|---|---|---|---|---|---|---|
| CRON 1. | ||||||||
| scrB |
*
Staphylococcus aureus subsp. aureus N315 Site: position = -127 score = 5.70743 sequence = ATGTGGAACCGATACCATAT Gene: SA1846: sucrose-6-phosphate hydrolase |
*
Staphylococcus capitis SK14 Site: position = -207 score = 5.81037 sequence = ATTTGGAACCGATACCACTA Gene: STACA0001_2125: sucrose-6-phosphate hydrolase |
*
Staphylococcus epidermidis ATCC 12228 Site: position = -233 score = 5.69255 sequence = AAATGGAACCGATACCACAT Gene: SE1640: sucrose-6-phosphate hydrolase |
Gene: Sca_1550: sucrose-6-phosphate hydrolase |
*
Staphylococcus haemolyticus JCSC1435 Site: position = -72 score = 5.72156 sequence = CTATGGAACCGATACCATAA Gene: SH0991: sucrose-6-phosphate hydrolase |
*
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 Site: position = -58 score = 6.16245 sequence = AAATGGAACCGGTACCAAAA Gene: SSP0837: sucrose-6-phosphate hydrolase |
*
Macrococcus caseolyticus JCSC5402 Site: position = -30 score = 6.13774 sequence = AAATGGAACCGGTTCCAAAG Gene: MCCL_0373: sucrose-6-phosphate hydrolase |
sucrose-6-phosphate hydrolase |
| scrK |
Gene: SA1845: fructokinase |
Gene: STACA0001_2126: fructokinase |
Gene: SE1639: fructokinase |
Gene: Sca_2175: fructokinase |
Gene: SH0992: fructokinase |
Gene: SSP0838: fructokinase |
Gene: MCCL_0374: fructokinase |
fructokinase |
| scrA2 |
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Gene: MCCL_0375: non-orthologous PTS system sucrose-specific IIBC component |
non-orthologous PTS system sucrose-specific IIBC component |
| CRON 2. | ||||||||
| scrA |
*
Staphylococcus aureus subsp. aureus N315 Site: position = -34 score = 5.68631 sequence = AAATGGAACCGGTTCTAATT Site: position = -63 score = 6.20238 sequence = TTTTGGAACCGGTTACAATA Gene: SA2167: PTS system sucrose-specific IIBC component |
*
Staphylococcus capitis SK14 Site: position = -65 score = 5.88124 sequence = TCTTGGAACCGGTTACAATA Site: position = -36 score = 5.18902 sequence = AAATGGAACCGGTTTCTAAA Gene: STACA0001_1097: PTS system sucrose-specific IIBC component |
*
Staphylococcus epidermidis ATCC 12228 Site: position = -60 score = 5.88124 sequence = GATTGGAACCGGTTACAATA Site: position = -31 score = 5.04452 sequence = TATTTGAATCGGTTCTAAAA Gene: SE1959: PTS system sucrose-specific IIBC component |
|
*
Staphylococcus haemolyticus JCSC1435 Site: position = -65 score = 6.02553 sequence = TTTTGGAACCGGTTACAATG Site: position = -37 score = 5.46057 sequence = AAATAGAACCGGTTCCATTG Gene: SH0671: PTS system sucrose-specific IIBC component |
*
Staphylococcus saprophyticus subsp. saprophyticus ATCC 15305 Site: position = -37 score = 6.16245 sequence = TTTTGGTACCGGTTCCATTT Site: position = -68 score = 5.6994 sequence = AGTTGGAACCGGTTACAATA Gene: SSP0512: PTS system sucrose-specific IIBC component |
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PTS system sucrose-specific IIBC component |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |