Regulog PdxR - Thermoanaerobacterales
| Regulator type: | Transcription factor |
| Regulator family: | GntR/MocR |
| Regulation mode: | |
| Biological process: | Pyridoxine biosynthesis |
| Effector: | Pyridoxal-5-phosphate |
| Phylum: | Firmicutes |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Thermoanaerobacterales
- By trascription factor - PdxR
- By TF family - GntR/MocR
- By effector - Pyridoxal-5-phosphate
- By pathway - Pyridoxine biosynthesis
| Genome | Genes | Operons |
|---|---|---|
| Anaerocellum thermophilum DSM 6725 | 3 | 2 |
| Caldicellulosiruptor saccharolyticus DSM 8903 | 3 | 2 |
| Carboxydothermus hydrogenoformans Z-2901 | ||
| Moorella thermoacetica ATCC 39073 | ||
| Thermoanaerobacter ethanolicus X514 | ||
| Thermoanaerobacter italicus Ab9 | ||
| Thermoanaerobacter tengcongensis MB4 |
| Genes | Function | |||||||
|---|---|---|---|---|---|---|---|---|
| CRON 1. | ||||||||
| pdxS |
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Anaerocellum thermophilum DSM 6725 Site: position = -109 score = 11.2275 sequence = TGTATCGATACA-(72)-TATATCGATACG Gene: Athe_1909: Pyridoxine biosynthesis glutamine amidotransferase, synthase subunit (EC 2.4.2.-) |
*
Caldicellulosiruptor saccharolyticus DSM 8903 Site: position = -108 score = 11.2275 sequence = TGTATCGATACA-(71)-TATATCGATACG Gene: Csac_1036: Pyridoxine biosynthesis glutamine amidotransferase, synthase subunit (EC 2.4.2.-) |
Gene: CHY_2703: Pyridoxine biosynthesis glutamine amidotransferase, synthase subunit (EC 2.4.2.-) |
Gene: Moth_0009: Pyridoxine biosynthesis glutamine amidotransferase, synthase subunit (EC 2.4.2.-) |
Gene: Teth514_2241: Pyridoxine biosynthesis glutamine amidotransferase, synthase subunit (EC 2.4.2.-) |
Gene: Thit_1264: Pyridoxine biosynthesis glutamine amidotransferase, synthase subunit (EC 2.4.2.-) |
Gene: TTE0823: Pyridoxine biosynthesis glutamine amidotransferase, synthase subunit (EC 2.4.2.-) |
Pyridoxine biosynthesis glutamine amidotransferase, synthase subunit (EC 2.4.2.-) |
| pdxT |
Gene: Athe_1908: Pyridoxine biosynthesis glutamine amidotransferase, glutaminase subunit (EC 2.4.2.-) |
Gene: Csac_1037: Pyridoxine biosynthesis glutamine amidotransferase, glutaminase subunit (EC 2.4.2.-) |
Gene: CHY_2702: Pyridoxine biosynthesis glutamine amidotransferase, glutaminase subunit (EC 2.4.2.-) |
Gene: Moth_0010: Pyridoxine biosynthesis glutamine amidotransferase, glutaminase subunit (EC 2.4.2.-) |
Gene: Teth514_2240: Pyridoxine biosynthesis glutamine amidotransferase, glutaminase subunit (EC 2.4.2.-) |
Gene: Thit_1263: Pyridoxine biosynthesis glutamine amidotransferase, glutaminase subunit (EC 2.4.2.-) |
Gene: TTE0822: Pyridoxine biosynthesis glutamine amidotransferase, glutaminase subunit (EC 2.4.2.-) |
Pyridoxine biosynthesis glutamine amidotransferase, glutaminase subunit (EC 2.4.2.-) |
| CRON 2. | ||||||||
| pdxR |
*
Anaerocellum thermophilum DSM 6725 Site: position = -79 score = 9.86904 sequence = CGTATCGATATA-(72)-TGTATCGATACA Gene: Athe_1910: Pyridoxine biosynthesis transcriptional regulator PdxR, GntR family |
*
Caldicellulosiruptor saccharolyticus DSM 8903 Site: position = -78 score = 9.86904 sequence = CGTATCGATATA-(71)-TGTATCGATACA Gene: Csac_1035: Pyridoxine biosynthesis transcriptional regulator PdxR, GntR family |
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Pyridoxine biosynthesis transcriptional regulator PdxR, GntR family |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |