Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulog VIBHAR_07005 - Vibrionales

Properties
Regulator type: Transcription factor
Regulator family: GntR/Others
Regulation mode:
Biological process: Multidrug resistance; Multidrug efflux
Effector:
Phylum: Proteobacteria/Gamma
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 5 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Photobacterium profundum SS9 3 1
Vibrio angustum S14
Vibrio cholerae O1 biovar eltor str. N16961
Vibrio fischeri ES114
Vibrio harveyi ATCC BAA-1116 3 1
Vibrio parahaemolyticus RIMD 2210633 3 1
Vibrio salmonicida LFI1238
Vibrio shilonii AK1 3 1
Vibrio splendidus LGP32 3 1
Vibrio vulnificus CMCP6
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
VIBHAR_07005
*
Photobacterium profundum SS9

Site:
position = -47
score = 6.52456
sequence = TGGTGTTATATATCACTATAACAGTA

Gene: PBPRA2039: Transcriptional regulator, GntR family
 
Vibrio angustum S14
 
Vibrio cholerae O1 biovar eltor str. N16961
 
Vibrio fischeri ES114
*
Vibrio harveyi ATCC BAA-1116

Site:
position = 82
score = 6.84912
sequence = TGGTGTTATACATATATATAACACCA

Gene: VIBHAR_07005: Transcriptional regulator, GntR family
*
Vibrio parahaemolyticus RIMD 2210633

Site:
position = -39
score = 6.69691
sequence = TAGTGTTATACATATATATAACACCA

Gene: VPA0034: Transcriptional regulator, GntR family
 
Vibrio salmonicida LFI1238
*
Vibrio shilonii AK1

Site:
position = -45
score = 6.32109
sequence = AGGTGTTATACATATATATAACACCA

Gene: VSAK1_22894: Transcriptional regulator, GntR family
*
Vibrio splendidus LGP32

Site:
position = -39
score = 6.22939
sequence = TAGTGTTATACACATGTATATCACCA

Gene: VS_II1187: Transcriptional regulator, GntR family
 
Vibrio vulnificus CMCP6
Transcriptional regulator, GntR family
XAC1547
 
Photobacterium profundum SS9

Gene: PBPRA2038: ABC transporter, ATP-binding protein
 
Vibrio angustum S14

Gene: VAS14_01881: ABC transporter, ATP-binding protein
 
Vibrio cholerae O1 biovar eltor str. N16961
 
Vibrio fischeri ES114

Gene: VF_A0912: ABC transporter, ATP-binding protein
 
Vibrio harveyi ATCC BAA-1116

Gene: VIBHAR_07006: ABC transporter, ATP-binding protein
 
Vibrio parahaemolyticus RIMD 2210633

Gene: VPA0033: ABC transporter, ATP-binding protein
 
Vibrio salmonicida LFI1238

Gene: VSAL_II0948: ABC transporter, ATP-binding protein
 
Vibrio shilonii AK1

Gene: VSAK1_22899: ABC transporter, ATP-binding protein
 
Vibrio splendidus LGP32

Gene: VS_II1188: ABC transporter, ATP-binding protein
 
Vibrio vulnificus CMCP6
ABC transporter, ATP-binding protein
XAC1546
 
Photobacterium profundum SS9

Gene: PBPRA2037: ABC transporter, permease protein
 
Vibrio angustum S14

Gene: VAS14_01886: ABC transporter, permease protein
 
Vibrio cholerae O1 biovar eltor str. N16961
 
Vibrio fischeri ES114

Gene: VF_A0913: ABC transporter, permease protein
 
Vibrio harveyi ATCC BAA-1116

Gene: VIBHAR_07007: ABC transporter, permease protein
 
Vibrio parahaemolyticus RIMD 2210633

Gene: VPA0032: ABC transporter, permease protein
 
Vibrio salmonicida LFI1238

Gene: VSAL_II0949: ABC transporter, permease protein
 
Vibrio shilonii AK1

Gene: VSAK1_22904: ABC transporter, permease protein
 
Vibrio splendidus LGP32

Gene: VS_II1189: ABC transporter, permease protein
 
Vibrio vulnificus CMCP6
ABC transporter, permease protein
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
Export
Regulated Genes [ Tab delimited format ] DOWNLOAD
Regulatory Sites [ FASTA format ] DOWNLOAD