Regulog Patl_0292 - Alteromonadales

Properties
Regulator type:	Transcription factor
Regulator family:	LacI
Regulation mode:	repressor
Biological process:
Effector:
Phylum:	Proteobacteria/gamma
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 2 sites [see more]

Member of regulog collections

By taxonomy - Alteromonadales
By TF family - LacI

Statistics of regulated genes
Genome	Genes	Operons
Alteromonadales bacterium TW-7
Alteromonas macleodii 'Deep ecotype'
Colwellia psychrerythraea 34H
Glaciecola sp. HTCC2999
Idiomarina baltica OS145
Idiomarina loihiensis L2TR
Pseudoalteromonas atlantica T6c	5	2
Pseudoalteromonas haloplanktis TAC125
Pseudoalteromonas tunicata D2

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes										Function

CRON 1.
Patl_0291	Alteromonadales bacterium TW-7	Alteromonas macleodii 'Deep ecotype'	Colwellia psychrerythraea 34H	Glaciecola sp. HTCC2999	Idiomarina baltica OS145	Idiomarina loihiensis L2TR	* Pseudoalteromonas atlantica T6c Site: position = -78 score = 7.44869 sequence = CAACTAAACCGGTTTAGTAG Gene: Patl_0291: Putative racemase	Pseudoalteromonas haloplanktis TAC125	Pseudoalteromonas tunicata D2	Putative racemase
Patl_0290	Alteromonadales bacterium TW-7	Alteromonas macleodii 'Deep ecotype'	Colwellia psychrerythraea 34H	Glaciecola sp. HTCC2999	Idiomarina baltica OS145	Idiomarina loihiensis L2TR	Pseudoalteromonas atlantica T6c Gene: Patl_0290: Putative oxidoreductase	Pseudoalteromonas haloplanktis TAC125	Pseudoalteromonas tunicata D2	Putative oxidoreductase
Patl_0289	Alteromonadales bacterium TW-7	Alteromonas macleodii 'Deep ecotype'	Colwellia psychrerythraea 34H	Glaciecola sp. HTCC2999	Idiomarina baltica OS145	Idiomarina loihiensis L2TR	Pseudoalteromonas atlantica T6c Gene: Patl_0289: sodium-solute symporter, putative	Pseudoalteromonas haloplanktis TAC125	Pseudoalteromonas tunicata D2	sodium-solute symporter, putative
Patl_0288	Alteromonadales bacterium TW-7	Alteromonas macleodii 'Deep ecotype'	Colwellia psychrerythraea 34H	Glaciecola sp. HTCC2999	Idiomarina baltica OS145	Idiomarina loihiensis L2TR	Pseudoalteromonas atlantica T6c Gene: Patl_0288: Hypothetical protein	Pseudoalteromonas haloplanktis TAC125	Pseudoalteromonas tunicata D2	Hypothetical protein

CRON 2.
Patl_0292	Alteromonadales bacterium TW-7	Alteromonas macleodii 'Deep ecotype'	Colwellia psychrerythraea 34H	Glaciecola sp. HTCC2999	Idiomarina baltica OS145	Idiomarina loihiensis L2TR	* Pseudoalteromonas atlantica T6c Site: position = -87 score = 7.44869 sequence = CTACTAAACCGGTTTAGTTG Gene: Patl_0292: Predicted transcriptional regulator, LacI family	Pseudoalteromonas haloplanktis TAC125	Pseudoalteromonas tunicata D2	Predicted transcriptional regulator, LacI family

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulog Patl_0292 - Alteromonadales

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --