Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulog YhcF - Listeriaceae

Properties
Regulator type: Transcription factor
Regulator family: GntR/Others
Regulation mode:
Biological process: Multidrug efflux; Multidrug resistance
Effector:
Phylum: Firmicutes
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 4 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Listeria innocua Clip11262 3 1
Listeria monocytogenes EGD-e 3 1
Listeria seeligeri serovar 1/2b str. SLCC3954 3 1
Listeria welshimeri serovar 6b str. SLCC5334 3 1
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
yhcF
*
Listeria innocua Clip11262

Site:
position = -49
score = 6.82514
sequence = AGTGTACTATTTACTTAATACACT

Gene: lin1836: Transcriptional regulator, GntR family
*
Listeria monocytogenes EGD-e

Site:
position = -49
score = 7.0098
sequence = AGTGTACTATTTAATTAATACACT

Gene: lmo1725: Transcriptional regulator, GntR family
*
Listeria seeligeri serovar 1/2b str. SLCC3954

Site:
position = -47
score = 6.82514
sequence = AGTGTACTATTTACTTAATACACT

Gene: lse_1696: Transcriptional regulator, GntR family
*
Listeria welshimeri serovar 6b str. SLCC5334

Site:
position = -50
score = 6.82514
sequence = AGTGTACTATTTACTTAATACACT

Gene: lwe1742: Transcriptional regulator, GntR family
Transcriptional regulator, GntR family
yhcG
 
Listeria innocua Clip11262

Gene: lin1835: ABC-type multidrug transport system, ATPase component
 
Listeria monocytogenes EGD-e

Gene: lmo1724: ABC-type multidrug transport system, ATPase component
 
Listeria seeligeri serovar 1/2b str. SLCC3954

Gene: lse_1695: ABC-type multidrug transport system, ATPase component
 
Listeria welshimeri serovar 6b str. SLCC5334

Gene: lwe1741: ABC-type multidrug transport system, ATPase component
ABC-type multidrug transport system, ATPase component
yhcI
 
Listeria innocua Clip11262

Gene: lin1834: ABC-type multidrug transport system, permease component
 
Listeria monocytogenes EGD-e

Gene: lmo1723: ABC-type multidrug transport system, permease component
 
Listeria seeligeri serovar 1/2b str. SLCC3954

Gene: lse_1694: ABC-type multidrug transport system, permease component
 
Listeria welshimeri serovar 6b str. SLCC5334

Gene: lwe1740: ABC-type multidrug transport system, permease component
ABC-type multidrug transport system, permease component
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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