Regulog Arth_2426 - Micrococcineae

Properties
Regulator type:	Transcription factor
Regulator family:	LacI
Regulation mode:	repressor
Biological process:	Sugar utilization
Effector:
Phylum:	Actinobacteria
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 12 sites [see more]

Member of regulog collections

By taxonomy - Micrococcineae
By TF family - LacI
By pathway - Sugar utilization

Statistics of regulated genes
Genome	Genes	Operons
Arthrobacter aurescens TC1
Arthrobacter chlorophenolicus A6	5	2
Arthrobacter sp. FB24	5	2
Beutenbergia cavernae DSM 12333	3	1
Brachybacterium faecium DSM 4810	3	1
Brevibacterium linens BL2
Clavibacter michiganensis subsp. michiganensis NCPPB 382
Janibacter sp. HTCC2649	7	2
Jonesia denitrificans DSM 20603
Kocuria rhizophila DC2201
Kytococcus sedentarius DSM 20547
Leifsonia xyli subsp. xyli str. CTCB07
Renibacterium salmoninarum ATCC 33209
Tropheryma whipplei str. Twist

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes															Function

CRON 1.
Arth_2426	Arthrobacter aurescens TC1 Gene: AAur_3699: Sugar utilization transctriptional regulator, LacI family	* Arthrobacter chlorophenolicus A6 Site: position = -128 score = 6.24395 sequence = TTGGGAAAGCGCATTCCCAC Site: position = -79 score = 5.89967 sequence = GTTGGCAAGCGCTTTCCGGA Gene: Achl_2180: Sugar utilization transctriptional regulator, LacI family	* Arthrobacter sp. FB24 Site: position = -81 score = 5.74855 sequence = CATGGCAAGCGCTTTCCCGA Site: position = -129 score = 6.13504 sequence = CTGGGAAAGCGCATTCCCAC Gene: Arth_2426: Sugar utilization transctriptional regulator, LacI family	Beutenbergia cavernae DSM 12333 Gene: Bcav_3360: Sugar utilization transctriptional regulator, LacI family	Brachybacterium faecium DSM 4810 Gene: Bfae_28980: Sugar utilization transctriptional regulator, LacI family	Brevibacterium linens BL2	Clavibacter michiganensis subsp. michiganensis NCPPB 382	* Janibacter sp. HTCC2649 Site: position = -137 score = 5.39524 sequence = TGCGGAGAGCGCTTTCCGCT Gene: JNB_06194: Sugar utilization transctriptional regulator, LacI family	Jonesia denitrificans DSM 20603	Kocuria rhizophila DC2201	Kytococcus sedentarius DSM 20547	Leifsonia xyli subsp. xyli str. CTCB07	Renibacterium salmoninarum ATCC 33209	Tropheryma whipplei str. Twist	Sugar utilization transctriptional regulator, LacI family
AAur_3697	Arthrobacter aurescens TC1 Gene: AAur_3697: putative lipase/esterase	Arthrobacter chlorophenolicus A6 Gene: Achl_2181: putative lipase/esterase	Arthrobacter sp. FB24 Gene: Arth_2427: endo-1,4-beta-xylanase B	Beutenbergia cavernae DSM 12333	Brachybacterium faecium DSM 4810	Brevibacterium linens BL2	Clavibacter michiganensis subsp. michiganensis NCPPB 382	Janibacter sp. HTCC2649	Jonesia denitrificans DSM 20603	Kocuria rhizophila DC2201	Kytococcus sedentarius DSM 20547	Leifsonia xyli subsp. xyli str. CTCB07	Renibacterium salmoninarum ATCC 33209	Tropheryma whipplei str. Twist	putative lipase/esterase

CRON 2.
JNB_06199	Arthrobacter aurescens TC1	Arthrobacter chlorophenolicus A6	Arthrobacter sp. FB24	Beutenbergia cavernae DSM 12333	Brachybacterium faecium DSM 4810	Brevibacterium linens BL2	Clavibacter michiganensis subsp. michiganensis NCPPB 382	* Janibacter sp. HTCC2649 Site: position = -61 score = 5.39524 sequence = AGCGGAAAGCGCTCTCCGCA Gene: JNB_06199: Hydroxymethylpyrimidine ABC transporter, transmembrane component	Jonesia denitrificans DSM 20603	Kocuria rhizophila DC2201	Kytococcus sedentarius DSM 20547	Leifsonia xyli subsp. xyli str. CTCB07	Renibacterium salmoninarum ATCC 33209	Tropheryma whipplei str. Twist	Hydroxymethylpyrimidine ABC transporter, transmembrane component
JNB_06204	Arthrobacter aurescens TC1	Arthrobacter chlorophenolicus A6	Arthrobacter sp. FB24	Beutenbergia cavernae DSM 12333	Brachybacterium faecium DSM 4810	Brevibacterium linens BL2	Clavibacter michiganensis subsp. michiganensis NCPPB 382	Janibacter sp. HTCC2649 Gene: JNB_06204: Hydroxymethylpyrimidine ABC transporter, substrate-binding component	Jonesia denitrificans DSM 20603	Kocuria rhizophila DC2201	Kytococcus sedentarius DSM 20547	Leifsonia xyli subsp. xyli str. CTCB07	Renibacterium salmoninarum ATCC 33209	Tropheryma whipplei str. Twist	Hydroxymethylpyrimidine ABC transporter, substrate-binding component
JNB_06209	Arthrobacter aurescens TC1	Arthrobacter chlorophenolicus A6	Arthrobacter sp. FB24	Beutenbergia cavernae DSM 12333	Brachybacterium faecium DSM 4810	Brevibacterium linens BL2	Clavibacter michiganensis subsp. michiganensis NCPPB 382	Janibacter sp. HTCC2649 Gene: JNB_06209: Hydroxymethylpyrimidine ABC transporter, ATPase component	Jonesia denitrificans DSM 20603	Kocuria rhizophila DC2201	Kytococcus sedentarius DSM 20547	Leifsonia xyli subsp. xyli str. CTCB07	Renibacterium salmoninarum ATCC 33209	Tropheryma whipplei str. Twist	Hydroxymethylpyrimidine ABC transporter, ATPase component
SCO2752	Arthrobacter aurescens TC1	* Arthrobacter chlorophenolicus A6 Site: position = -110 score = 5.89967 sequence = TCCGGAAAGCGCTTGCCAAC Site: position = -61 score = 6.24395 sequence = GTGGGAATGCGCTTTCCCAA Gene: Achl_2179: Predicted glucose-fructose oxidoreductase	* Arthrobacter sp. FB24 Site: position = -55 score = 6.13504 sequence = GTGGGAATGCGCTTTCCCAG Site: position = -103 score = 5.74855 sequence = TCGGGAAAGCGCTTGCCATG Gene: Arth_2425: Predicted glucose-fructose oxidoreductase	* Beutenbergia cavernae DSM 12333 Site: position = -31 score = 5.84884 sequence = GCCGGAAAGCGCATTCCCTA Gene: Bcav_3365: Predicted glucose-fructose oxidoreductase	* Brachybacterium faecium DSM 4810 Site: position = -116 score = 5.50025 sequence = CTGGACAAGCGCTTGCCCGA Gene: Bfae_29090: Predicted glucose-fructose oxidoreductase	Brevibacterium linens BL2	Clavibacter michiganensis subsp. michiganensis NCPPB 382	Janibacter sp. HTCC2649 Gene: JNB_06214: Predicted glucose-fructose oxidoreductase	Jonesia denitrificans DSM 20603	Kocuria rhizophila DC2201	Kytococcus sedentarius DSM 20547	Leifsonia xyli subsp. xyli str. CTCB07	Renibacterium salmoninarum ATCC 33209	Tropheryma whipplei str. Twist	Predicted glucose-fructose oxidoreductase
SCO2751	Arthrobacter aurescens TC1 Gene: AAur_3700: Conserved hypothetical protein, potentially related to sugar utilization	Arthrobacter chlorophenolicus A6 Gene: Achl_2178: Conserved hypothetical protein, potentially related to sugar utilization	Arthrobacter sp. FB24 Gene: Arth_2424: Conserved hypothetical protein, potentially related to sugar utilization	Beutenbergia cavernae DSM 12333 Gene: Bcav_3366: Conserved hypothetical protein, potentially related to sugar utilization	Brachybacterium faecium DSM 4810 Gene: Bfae_29080: Conserved hypothetical protein, potentially related to sugar utilization	Brevibacterium linens BL2	Clavibacter michiganensis subsp. michiganensis NCPPB 382	Janibacter sp. HTCC2649 Gene: JNB_06219: Conserved hypothetical protein, potentially related to sugar utilization	Jonesia denitrificans DSM 20603	Kocuria rhizophila DC2201	Kytococcus sedentarius DSM 20547	Leifsonia xyli subsp. xyli str. CTCB07	Renibacterium salmoninarum ATCC 33209	Tropheryma whipplei str. Twist	Conserved hypothetical protein, potentially related to sugar utilization
SCO2750	Arthrobacter aurescens TC1 Gene: AAur_3701: Predicted sugar phosphate isomerases/epimerase	Arthrobacter chlorophenolicus A6 Gene: Achl_2177: Predicted sugar phosphate isomerases/epimerase	Arthrobacter sp. FB24 Gene: Arth_2423: Predicted sugar phosphate isomerases/epimerase	Beutenbergia cavernae DSM 12333 Gene: Bcav_3367: Predicted sugar phosphate isomerases/epimerase	Brachybacterium faecium DSM 4810 Gene: Bfae_29070: Predicted sugar phosphate isomerases/epimerase	Brevibacterium linens BL2	Clavibacter michiganensis subsp. michiganensis NCPPB 382	Janibacter sp. HTCC2649 Gene: JNB_06224: Predicted sugar phosphate isomerases/epimerase	Jonesia denitrificans DSM 20603	Kocuria rhizophila DC2201	Kytococcus sedentarius DSM 20547	Leifsonia xyli subsp. xyli str. CTCB07	Renibacterium salmoninarum ATCC 33209	Tropheryma whipplei str. Twist	Predicted sugar phosphate isomerases/epimerase

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

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Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulog Arth_2426 - Micrococcineae

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --