Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulog Nfa3720 - Nocardiaceae

Properties
Regulator type: Transcription factor
Regulator family: GntR/Others
Regulation mode:
Biological process: Multidrug resistance; Multidrug efflux
Effector:
Phylum: Actinobacteria
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 3 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Nocardia farcinica IFM 10152 3 1
Rhodococcus erythropolis PR4 3 1
Rhodococcus opacus B4 3 1
Rhodococcus sp. RHA1
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
Nfa3720
*
Nocardia farcinica IFM 10152

Site:
position = -20
score = 6.99866
sequence = TATGGTTCATTACATGAGTAATGAACCACT

Gene: nfa3720: Transcriptional regulator, GntR family
*
Rhodococcus erythropolis PR4

Site:
position = -51
score = 6.60131
sequence = TATGGTTCATTACATGAGCAATGAACCAGT

Gene: RER_12520: Transcriptional regulator, GntR family
*
Rhodococcus opacus B4

Site:
position = -51
score = 6.96152
sequence = TATGGTTCATTACATGAGTAATGAACCGAT

Gene: ROP_66420: Transcriptional regulator, GntR family
 
Rhodococcus sp. RHA1
Transcriptional regulator, GntR family
lp_2743
 
Nocardia farcinica IFM 10152

Gene: nfa3730: ABC-type multidrug transport system, ATPase component
 
Rhodococcus erythropolis PR4

Gene: RER_12510: ABC-type multidrug transport system, ATPase component
 
Rhodococcus opacus B4

Gene: ROP_66410: ABC-type multidrug transport system, ATPase component
 
Rhodococcus sp. RHA1

Gene: RHA1_ro06607: ABC-type multidrug transport system, ATPase component
ABC-type multidrug transport system, ATPase component
lp_2744
 
Nocardia farcinica IFM 10152

Gene: nfa3740: ABC-type multidrug transport system, permease component
 
Rhodococcus erythropolis PR4

Gene: RER_12500: ABC-type multidrug transport system, permease component
 
Rhodococcus opacus B4

Gene: ROP_66400: ABC-type multidrug transport system, permease component
 
Rhodococcus sp. RHA1

Gene: RHA1_ro06606: ABC-type multidrug transport system, permease component
ABC-type multidrug transport system, permease component
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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