Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
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Regulog ScrR - Burkholderia

Properties
Regulator type: Transcription factor
Regulator family: LacI
Regulation mode: repressor
Biological process: Sucrose utilization
Effector: Sucrose
Phylum: Proteobacteria/beta
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 20 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Burkholderia cepacia AMMD 3 2
Burkholderia glumae BGR1
Burkholderia mallei ATCC 23344 3 2
Burkholderia phymatum STM815 4 2
Burkholderia pseudomallei K96243 3 2
Burkholderia sp. 383
Burkholderia vietnamiensis G4 3 2
Burkholderia xenovorans LB400
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
sacB
*
Burkholderia cepacia AMMD

Site:
position = -94
score = 6.28891
sequence = CGTCCAAACCGGTTTGAAAT

Site:
position = -72
score = 6.32094
sequence = CATCCGAACCGGTTTGGACA

Gene: Bamb_3698: Levansucrase (EC 2.4.1.10)
 
Burkholderia glumae BGR1
*
Burkholderia mallei ATCC 23344

Site:
position = -92
score = 6.08894
sequence = CGCCCAAACCGGTTTGAATT

Site:
position = -70
score = 6.77066
sequence = CATCCAAACCGGTTTGGATA

Gene: BMAA0466: Levansucrase (EC 2.4.1.10)
*
Burkholderia phymatum STM815

Site:
position = -73
score = 5.75305
sequence = CTTCAAAACCGGTTTGGCCT

Site:
position = -51
score = 5.98118
sequence = GATCCAAACCGATTTGGAAA

Gene: Bphy_6047: Levansucrase (EC 2.4.1.10)
*
Burkholderia pseudomallei K96243

Site:
position = -92
score = 6.08894
sequence = CGCCCAAACCGGTTTGAATT

Site:
position = -70
score = 6.77066
sequence = CATCCAAACCGGTTTGGATA

Gene: BPSS0543: Levansucrase (EC 2.4.1.10)
 
Burkholderia sp. 383
*
Burkholderia vietnamiensis G4

Site:
position = -95
score = 5.84341
sequence = CGACCAAACCGGTTTGAAAT

Site:
position = -73
score = 6.69531
sequence = TATCCAAACCGGTTTGGACA

Gene: Bcep1808_4836: Levansucrase (EC 2.4.1.10)
 
Burkholderia xenovorans LB400
Levansucrase (EC 2.4.1.10)
Bamb_3698
 
Burkholderia cepacia AMMD
 
Burkholderia glumae BGR1
 
Burkholderia mallei ATCC 23344
 
Burkholderia phymatum STM815

Gene: Bphy_6048: Putative transcriptional regulator, GntR family
 
Burkholderia pseudomallei K96243
 
Burkholderia sp. 383
 
Burkholderia vietnamiensis G4
 
Burkholderia xenovorans LB400
Putative transcriptional regulator, GntR family
scrB
 
Burkholderia cepacia AMMD

Gene: Bamb_3697: Sucrose hydrolase (EC 3.2.1.26)
 
Burkholderia glumae BGR1
 
Burkholderia mallei ATCC 23344

Gene: BMAA0465: Sucrose hydrolase (EC 3.2.1.26)
 
Burkholderia phymatum STM815

Gene: Bphy_6049: Sucrose hydrolase (EC 3.2.1.26)
 
Burkholderia pseudomallei K96243

Gene: BPSS0542: Sucrose hydrolase (EC 3.2.1.26)
 
Burkholderia sp. 383
 
Burkholderia vietnamiensis G4

Gene: Bcep1808_4835: Sucrose hydrolase (EC 3.2.1.26)
 
Burkholderia xenovorans LB400
Sucrose hydrolase (EC 3.2.1.26)
 
CRON 2.
scrR
*
Burkholderia cepacia AMMD

Site:
position = -117
score = 6.32094
sequence = TGTCCAAACCGGTTCGGATG

Site:
position = -95
score = 6.28891
sequence = ATTTCAAACCGGTTTGGACG

Gene: Bamb_3699: Sucrose utilization transcriptional regulator ScrR, LacI family
 
Burkholderia glumae BGR1
*
Burkholderia mallei ATCC 23344

Site:
position = -144
score = 6.77066
sequence = TATCCAAACCGGTTTGGATG

Site:
position = -122
score = 6.08894
sequence = AATTCAAACCGGTTTGGGCG

Gene: BMAA0467: Sucrose utilization transcriptional regulator ScrR, LacI family
*
Burkholderia phymatum STM815

Site:
position = -111
score = 5.75305
sequence = AGGCCAAACCGGTTTTGAAG

Site:
position = -133
score = 5.98118
sequence = TTTCCAAATCGGTTTGGATC

Gene: Bphy_6046: Sucrose utilization transcriptional regulator ScrR, LacI family
*
Burkholderia pseudomallei K96243

Site:
position = -138
score = 6.77066
sequence = TATCCAAACCGGTTTGGATG

Site:
position = -116
score = 6.08894
sequence = AATTCAAACCGGTTTGGGCG

Gene: BPSS0544: Sucrose utilization transcriptional regulator ScrR, LacI family
 
Burkholderia sp. 383
*
Burkholderia vietnamiensis G4

Site:
position = -129
score = 6.69531
sequence = TGTCCAAACCGGTTTGGATA

Site:
position = -107
score = 5.84341
sequence = ATTTCAAACCGGTTTGGTCG

Gene: Bcep1808_4837: Sucrose utilization transcriptional regulator ScrR, LacI family
 
Burkholderia xenovorans LB400
Sucrose utilization transcriptional regulator ScrR, LacI family
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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