Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulog PtxS - Ralstonia

Properties
Regulator type: Transcription factor
Regulator family: LacI
Regulation mode: repressor
Biological process: 2-ketogluconate utilization
Effector: 2-keto-D-gluconate
Phylum: Proteobacteria/beta
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 3 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Cupriavidus taiwanensis
Ralstonia eutropha H16 8 2
Ralstonia eutropha JMP134
Ralstonia metallidurans CH34
Ralstonia pickettii 12J 5 1
Ralstonia solanacearum GMI1000
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
kguS
 
Cupriavidus taiwanensis
*
Ralstonia eutropha H16

Site:
position = -79
score = 6.24412
sequence = TCCTGAAACCGGTTTCAAAA

Gene: H16_B1807: Putative 2-ketogluconate ABC transporter, substrate-binding component
 
Ralstonia eutropha JMP134
 
Ralstonia metallidurans CH34
 
Ralstonia pickettii 12J
 
Ralstonia solanacearum GMI1000
Putative 2-ketogluconate ABC transporter, substrate-binding component
kguC
 
Cupriavidus taiwanensis
 
Ralstonia eutropha H16

Gene: H16_B1808: Putative 2-ketogluconate ABC transporter, permease component
 
Ralstonia eutropha JMP134
 
Ralstonia metallidurans CH34
 
Ralstonia pickettii 12J
 
Ralstonia solanacearum GMI1000
Putative 2-ketogluconate ABC transporter, permease component
kguB
 
Cupriavidus taiwanensis
 
Ralstonia eutropha H16

Gene: H16_B1809: Putative 2-ketogluconate ABC transporter, permease component
 
Ralstonia eutropha JMP134
 
Ralstonia metallidurans CH34
 
Ralstonia pickettii 12J
 
Ralstonia solanacearum GMI1000
Putative 2-ketogluconate ABC transporter, permease component
kguA
 
Cupriavidus taiwanensis
 
Ralstonia eutropha H16

Gene: H16_B1810: Putative 2-ketogluconate ABC transporter, ATPase component
 
Ralstonia eutropha JMP134
 
Ralstonia metallidurans CH34
 
Ralstonia pickettii 12J
 
Ralstonia solanacearum GMI1000
Putative 2-ketogluconate ABC transporter, ATPase component
kguE
 
Cupriavidus taiwanensis
 
Ralstonia eutropha H16

Gene: H16_B1811: Epimerase KguE
 
Ralstonia eutropha JMP134
 
Ralstonia metallidurans CH34
*
Ralstonia pickettii 12J

Site:
position = -36
score = 4.84809
sequence = AATTGGAACCGGTTCCATAA

Gene: Rpic_0689: Epimerase KguE
 
Ralstonia solanacearum GMI1000
Epimerase KguE
kguK
 
Cupriavidus taiwanensis
 
Ralstonia eutropha H16

Gene: H16_B1812: 2-ketogluconate kinase EC=2.7.1.13
 
Ralstonia eutropha JMP134
 
Ralstonia metallidurans CH34
 
Ralstonia pickettii 12J

Gene: Rpic_0690: 2-ketogluconate kinase EC=2.7.1.13
 
Ralstonia solanacearum GMI1000
2-ketogluconate kinase EC=2.7.1.13
kguD
 
Cupriavidus taiwanensis
 
Ralstonia eutropha H16

Gene: H16_B1813: 2-ketogluconate-6-phosphate reductase EC=1.1.1.43
 
Ralstonia eutropha JMP134
 
Ralstonia metallidurans CH34
 
Ralstonia pickettii 12J

Gene: Rpic_0692: 2-ketogluconate-6-phosphate reductase EC=1.1.1.43
 
Ralstonia solanacearum GMI1000
2-ketogluconate-6-phosphate reductase EC=1.1.1.43
kguT
 
Cupriavidus taiwanensis
 
Ralstonia eutropha H16
 
Ralstonia eutropha JMP134
 
Ralstonia metallidurans CH34
 
Ralstonia pickettii 12J

Gene: Rpic_0691: 2-ketogluconate transporter
 
Ralstonia solanacearum GMI1000
2-ketogluconate transporter
ptxS
 
Cupriavidus taiwanensis
*
Ralstonia eutropha H16

Site:
position = -33
score = 4.89675
sequence = TCGTGAAACTGGTTTCACCG

Gene: H16_B1806: 2-ketogluconate utilization repressor PtxS, LacI family
 
Ralstonia eutropha JMP134
 
Ralstonia metallidurans CH34
 
Ralstonia pickettii 12J

Gene: Rpic_0693: 2-ketogluconate utilization repressor PtxS, LacI family
 
Ralstonia solanacearum GMI1000
2-ketogluconate utilization repressor PtxS, LacI family
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes [ Tab delimited format ] DOWNLOAD
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