Regulog Bphy_4590 - Burkholderia
| Regulator type: | Transcription factor |
| Regulator family: | LacI |
| Regulation mode: | repressor |
| Biological process: | Sugar utilization |
| Effector: | |
| Phylum: | Proteobacteria/beta |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Burkholderia
- By TF family - LacI
- By pathway - Sugar utilization
| Genome | Genes | Operons |
|---|---|---|
| Burkholderia cepacia AMMD | 4 | 2 |
| Burkholderia glumae BGR1 | 4 | 1 |
| Burkholderia mallei ATCC 23344 | ||
| Burkholderia phymatum STM815 | 4 | 2 |
| Burkholderia pseudomallei K96243 | ||
| Burkholderia sp. 383 | 4 | 2 |
| Burkholderia vietnamiensis G4 | 4 | 2 |
| Burkholderia xenovorans LB400 |
| Genes | Function | ||||||||
|---|---|---|---|---|---|---|---|---|---|
| CRON 1. | |||||||||
| Bphy_4591 |
*
Burkholderia cepacia AMMD Site: position = -21 score = 6.70009 sequence = AAATGTAAGCGGTTACATTC Gene: Bamb_1343: Predicted sugar kinase |
*
Burkholderia glumae BGR1 Site: position = -49 score = 6.10819 sequence = AAATGTAAGCGCTAACATCA Site: position = -125 score = 6.69218 sequence = CCATGTAAGCGCTAACATTT Gene: bglu_2g08900: Predicted sugar kinase |
|
*
Burkholderia phymatum STM815 Site: position = -134 score = 6.39628 sequence = AGATGTAAGCGCTAACATTA Gene: Bphy_4591: Predicted sugar kinase |
|
*
Burkholderia sp. 383 Site: position = -24 score = 6.79746 sequence = AAATGTAAGCGATTACATTC Gene: Bcep18194_C7623: Predicted sugar kinase |
*
Burkholderia vietnamiensis G4 Site: position = -21 score = 6.70009 sequence = AAATGTAAGCGATTACATTG Gene: Bcep1808_1423: Predicted sugar kinase |
|
Predicted sugar kinase |
| Bphy_4592 |
Gene: Bamb_1344: Predicted sugar transporter |
Gene: bglu_2g08890: Predicted sugar transporter |
|
Gene: Bphy_4592: Predicted sugar transporter |
|
Gene: Bcep18194_C7622: Predicted sugar transporter |
Gene: Bcep1808_1424: Predicted sugar transporter |
|
Predicted sugar transporter |
| COG0329 |
Gene: Bamb_1345: predited dihydrodipicolinate synthase/N-acetylneuraminate lyase family protein |
Gene: bglu_2g08880: predited dihydrodipicolinate synthase/N-acetylneuraminate lyase family protein |
|
Gene: Bphy_4593: predited dihydrodipicolinate synthase/N-acetylneuraminate lyase family protein |
|
Gene: Bcep18194_C7621: predited dihydrodipicolinate synthase/N-acetylneuraminate lyase family protein |
Gene: Bcep1808_1425: predited dihydrodipicolinate synthase/N-acetylneuraminate lyase family protein |
|
predited dihydrodipicolinate synthase/N-acetylneuraminate lyase family protein |
| Bphy_4590 |
*
Burkholderia cepacia AMMD Site: position = -237 score = 6.73772 sequence = GAATGTAACCGCTTACATTT Gene: Bamb_1342: Predicted transcriptional regulator, LacI family |
Gene: bglu_2g08870: Predicted transcriptional regulator, LacI family |
|
*
Burkholderia phymatum STM815 Site: position = -218 score = 6.24425 sequence = CCGTGTTAGCGCTTACATTT Gene: Bphy_4590: Predicted transcriptional regulator, LacI family |
|
*
Burkholderia sp. 383 Site: position = -237 score = 6.83509 sequence = GAATGTAATCGCTTACATTT Gene: Bcep18194_C7624: Predicted transcriptional regulator, LacI family |
*
Burkholderia vietnamiensis G4 Site: position = -240 score = 6.89863 sequence = CAATGTAATCGCTTACATTT Gene: Bcep1808_1422: Predicted transcriptional regulator, LacI family |
|
Predicted transcriptional regulator, LacI family |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |