Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulog SMb21598 - Rhizobiales

Properties
Regulator type: Transcription factor
Regulator family: LacI
Regulation mode:
Biological process: Sugar utilization
Effector:
Phylum: Proteobacteria/Alpha
Visualization:
Allows to visualize regulog content in the context of metabolic pathways
Built upon 13 sites [see more]
Member of regulog collections
Statistics of regulated genes
Genome Genes Operons
Agrobacterium tumefaciens str. C58 (Cereon) 7 2
Azorhizobium caulinodans ORS 571
Bartonella quintana str. Toulouse
Bradyrhizobium japonicum USDA 110
Bradyrhizobium sp. BTAi1
Brucella melitensis 16M
Mesorhizobium loti MAFF303099 3 2
Mesorhizobium sp. BNC1
Nitrobacter winogradskyi Nb-255
Rhizobium etli CFN 42 7 2
Rhizobium leguminosarum bv. viciae 3841 7 2
Rhizobium sp. NGR234 7 2
Rhodopseudomonas palustris CGA009
Sinorhizobium meliloti 1021 7 2
Xanthobacter autotrophicus Py2
Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes Function
 
CRON 1.
COG0673
*
Agrobacterium tumefaciens str. C58 (Cereon)

Site:
position = -62
score = 6.4207
sequence = TCTCGTAAACGTTTACGACG

Gene: Atu4363: Predicted dehydrogenases and related proteins
 
Azorhizobium caulinodans ORS 571
 
Bartonella quintana str. Toulouse
 
Bradyrhizobium japonicum USDA 110
 
Bradyrhizobium sp. BTAi1
 
Brucella melitensis 16M
*
Mesorhizobium loti MAFF303099

Site:
position = -88
score = 6.49503
sequence = TCTCGTAAACGTTTACGGAA

Gene: mll1511: Predicted dehydrogenases and related proteins
 
Mesorhizobium sp. BNC1
 
Nitrobacter winogradskyi Nb-255
*
Rhizobium etli CFN 42

Site:
position = -99
score = 6.36396
sequence = AGTCGTAAACGTTTACGGAG

Gene: RHE_PB00117: Predicted dehydrogenases and related proteins
*
Rhizobium leguminosarum bv. viciae 3841

Site:
position = -64
score = 6.36396
sequence = AGTCGTAAACGTTTACGGAG

Gene: pRL90239: Predicted dehydrogenases and related proteins
*
Rhizobium sp. NGR234

Site:
position = -98
score = 6.4383
sequence = TTCCGTAAACGTTTACGGAC

Gene: NGR_b15590: Predicted dehydrogenases and related proteins
 
Rhodopseudomonas palustris CGA009
*
Sinorhizobium meliloti 1021

Site:
position = -58
score = 6.60754
sequence = TTCCGTAAACGTTTACGGTG

Gene: SMb21597: Predicted dehydrogenases and related proteins
 
Xanthobacter autotrophicus Py2
Predicted dehydrogenases and related proteins
COG1082
 
Agrobacterium tumefaciens str. C58 (Cereon)

Gene: Atu4362: Sugar phosphate isomerases/epimerases
 
Azorhizobium caulinodans ORS 571
 
Bartonella quintana str. Toulouse
 
Bradyrhizobium japonicum USDA 110
 
Bradyrhizobium sp. BTAi1
 
Brucella melitensis 16M
 
Mesorhizobium loti MAFF303099

Gene: mll1509: Sugar phosphate isomerases/epimerases
 
Mesorhizobium sp. BNC1
 
Nitrobacter winogradskyi Nb-255
 
Rhizobium etli CFN 42

Gene: RHE_PB00116: Sugar phosphate isomerases/epimerases
 
Rhizobium leguminosarum bv. viciae 3841

Gene: pRL90238: Sugar phosphate isomerases/epimerases
 
Rhizobium sp. NGR234

Gene: NGR_b15580: Sugar phosphate isomerases/epimerases
 
Rhodopseudomonas palustris CGA009
 
Sinorhizobium meliloti 1021

Gene: SMb21596: Sugar phosphate isomerases/epimerases
 
Xanthobacter autotrophicus Py2
Sugar phosphate isomerases/epimerases
SMb21595
 
Agrobacterium tumefaciens str. C58 (Cereon)

Gene: Atu4361: Sugar ABC transporter, periplasmic sugar-binding protein
 
Azorhizobium caulinodans ORS 571
 
Bartonella quintana str. Toulouse
 
Bradyrhizobium japonicum USDA 110
 
Bradyrhizobium sp. BTAi1
 
Brucella melitensis 16M
 
Mesorhizobium loti MAFF303099
 
Mesorhizobium sp. BNC1
 
Nitrobacter winogradskyi Nb-255
 
Rhizobium etli CFN 42

Gene: RHE_PB00115: Sugar ABC transporter, periplasmic sugar-binding protein
 
Rhizobium leguminosarum bv. viciae 3841

Gene: pRL90237: Sugar ABC transporter, periplasmic sugar-binding protein
 
Rhizobium sp. NGR234

Gene: NGR_b15570: Sugar ABC transporter, periplasmic sugar-binding protein
 
Rhodopseudomonas palustris CGA009
 
Sinorhizobium meliloti 1021

Gene: SMb21595: Sugar ABC transporter, periplasmic sugar-binding protein
 
Xanthobacter autotrophicus Py2
Sugar ABC transporter, periplasmic sugar-binding protein
SMb21594
 
Agrobacterium tumefaciens str. C58 (Cereon)

Gene: Atu4360: Sugar ABC transporter, membrane spanning protein
 
Azorhizobium caulinodans ORS 571
 
Bartonella quintana str. Toulouse
 
Bradyrhizobium japonicum USDA 110
 
Bradyrhizobium sp. BTAi1
 
Brucella melitensis 16M
 
Mesorhizobium loti MAFF303099
 
Mesorhizobium sp. BNC1
 
Nitrobacter winogradskyi Nb-255
 
Rhizobium etli CFN 42

Gene: RHE_PB00114: Sugar ABC transporter, membrane spanning protein
 
Rhizobium leguminosarum bv. viciae 3841

Gene: pRL90235: Sugar ABC transporter, membrane spanning protein
 
Rhizobium sp. NGR234

Gene: NGR_b15560: Sugar ABC transporter, membrane spanning protein
 
Rhodopseudomonas palustris CGA009
 
Sinorhizobium meliloti 1021

Gene: SMb21594: Sugar ABC transporter, membrane spanning protein
 
Xanthobacter autotrophicus Py2
Sugar ABC transporter, membrane spanning protein
SMb21593
 
Agrobacterium tumefaciens str. C58 (Cereon)

Gene: Atu4359: Sugar ABC transporter, inner membrane protein
 
Azorhizobium caulinodans ORS 571
 
Bartonella quintana str. Toulouse
 
Bradyrhizobium japonicum USDA 110
 
Bradyrhizobium sp. BTAi1
 
Brucella melitensis 16M
 
Mesorhizobium loti MAFF303099
 
Mesorhizobium sp. BNC1
 
Nitrobacter winogradskyi Nb-255
 
Rhizobium etli CFN 42

Gene: RHE_PB00113: Sugar ABC transporter, inner membrane protein
 
Rhizobium leguminosarum bv. viciae 3841

Gene: pRL90234: Sugar ABC transporter, inner membrane protein
 
Rhizobium sp. NGR234

Gene: NGR_b15550: Sugar ABC transporter, inner membrane protein
 
Rhodopseudomonas palustris CGA009
 
Sinorhizobium meliloti 1021

Gene: SMb21593: Sugar ABC transporter, inner membrane protein
 
Xanthobacter autotrophicus Py2
Sugar ABC transporter, inner membrane protein
SMb21592
 
Agrobacterium tumefaciens str. C58 (Cereon)

Gene: Atu4358: Sugar ABC transporter, ATP-binding protein
 
Azorhizobium caulinodans ORS 571
 
Bartonella quintana str. Toulouse
 
Bradyrhizobium japonicum USDA 110
 
Bradyrhizobium sp. BTAi1
 
Brucella melitensis 16M
 
Mesorhizobium loti MAFF303099
 
Mesorhizobium sp. BNC1
 
Nitrobacter winogradskyi Nb-255
 
Rhizobium etli CFN 42

Gene: RHE_PB00112: Sugar ABC transporter, ATP-binding protein
 
Rhizobium leguminosarum bv. viciae 3841

Gene: pRL90233: Sugar ABC transporter, ATP-binding protein
 
Rhizobium sp. NGR234

Gene: NGR_b15540: Sugar ABC transporter, ATP-binding protein
 
Rhodopseudomonas palustris CGA009
 
Sinorhizobium meliloti 1021

Gene: SMb21592: Sugar ABC transporter, ATP-binding protein
 
Xanthobacter autotrophicus Py2
Sugar ABC transporter, ATP-binding protein
 
CRON 2.
SMb21598
*
Agrobacterium tumefaciens str. C58 (Cereon)

Site:
position = -96
score = 6.57232
sequence = CGTCGTAAACGTTTACGAGA

Gene: Atu4364: Transcriptional regulator for sugar utilization, LacI family
 
Azorhizobium caulinodans ORS 571
 
Bartonella quintana str. Toulouse
 
Bradyrhizobium japonicum USDA 110
 
Bradyrhizobium sp. BTAi1
 
Brucella melitensis 16M
*
Mesorhizobium loti MAFF303099

Site:
position = -121
score = 6.77499
sequence = TTCCGTAAACGTTTACGAGA

Site:
position = -134
score = 5.44673
sequence = CGCCGTAAACGTTTTCCGTA

Gene: mlr1512: Transcriptional regulator for sugar utilization, LacI family
 
Mesorhizobium sp. BNC1
 
Nitrobacter winogradskyi Nb-255
*
Rhizobium etli CFN 42

Site:
position = -91
score = 6.65798
sequence = CTCCGTAAACGTTTACGACT

Gene: RHE_PB00118: Transcriptional regulator for sugar utilization, LacI family
*
Rhizobium leguminosarum bv. viciae 3841

Site:
position = -171
score = 6.65798
sequence = CTCCGTAAACGTTTACGACT

Gene: pRL90240: Transcriptional regulator for sugar utilization, LacI family
*
Rhizobium sp. NGR234

Site:
position = -63
score = 6.7696
sequence = GTCCGTAAACGTTTACGGAA

Gene: NGR_b15600: Transcriptional regulator for sugar utilization, LacI family
 
Rhodopseudomonas palustris CGA009
*
Sinorhizobium meliloti 1021

Site:
position = -195
score = 6.70363
sequence = CACCGTAAACGTTTACGGAA

Gene: SMb21598: Transcriptional regulator for sugar utilization, LacI family
 
Xanthobacter autotrophicus Py2
Transcriptional regulator for sugar utilization, LacI family
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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