Regulog SMb21598 - Rhizobiales

Properties
Regulator type:	Transcription factor
Regulator family:	LacI
Regulation mode:
Biological process:	Sugar utilization
Effector:
Phylum:	Proteobacteria/Alpha
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 13 sites [see more]

Member of regulog collections

By taxonomy - Rhizobiales
By TF family - LacI
By pathway - Sugar utilization

Statistics of regulated genes
Genome	Genes	Operons
Agrobacterium tumefaciens str. C58 (Cereon)	7	2
Azorhizobium caulinodans ORS 571
Bartonella quintana str. Toulouse
Bradyrhizobium japonicum USDA 110
Bradyrhizobium sp. BTAi1
Brucella melitensis 16M
Mesorhizobium loti MAFF303099	3	2
Mesorhizobium sp. BNC1
Nitrobacter winogradskyi Nb-255
Rhizobium etli CFN 42	7	2
Rhizobium leguminosarum bv. viciae 3841	7	2
Rhizobium sp. NGR234	7	2
Rhodopseudomonas palustris CGA009
Sinorhizobium meliloti 1021	7	2
Xanthobacter autotrophicus Py2

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes																Function

CRON 1.
COG0673	* Agrobacterium tumefaciens str. C58 (Cereon) Site: position = -62 score = 6.4207 sequence = TCTCGTAAACGTTTACGACG Gene: Atu4363: Predicted dehydrogenases and related proteins	Azorhizobium caulinodans ORS 571	Bartonella quintana str. Toulouse	Bradyrhizobium japonicum USDA 110	Bradyrhizobium sp. BTAi1	Brucella melitensis 16M	* Mesorhizobium loti MAFF303099 Site: position = -88 score = 6.49503 sequence = TCTCGTAAACGTTTACGGAA Gene: mll1511: Predicted dehydrogenases and related proteins	Mesorhizobium sp. BNC1	Nitrobacter winogradskyi Nb-255	* Rhizobium etli CFN 42 Site: position = -99 score = 6.36396 sequence = AGTCGTAAACGTTTACGGAG Gene: RHE_PB00117: Predicted dehydrogenases and related proteins	* Rhizobium leguminosarum bv. viciae 3841 Site: position = -64 score = 6.36396 sequence = AGTCGTAAACGTTTACGGAG Gene: pRL90239: Predicted dehydrogenases and related proteins	* Rhizobium sp. NGR234 Site: position = -98 score = 6.4383 sequence = TTCCGTAAACGTTTACGGAC Gene: NGR_b15590: Predicted dehydrogenases and related proteins	Rhodopseudomonas palustris CGA009	* Sinorhizobium meliloti 1021 Site: position = -58 score = 6.60754 sequence = TTCCGTAAACGTTTACGGTG Gene: SMb21597: Predicted dehydrogenases and related proteins	Xanthobacter autotrophicus Py2	Predicted dehydrogenases and related proteins
COG1082	Agrobacterium tumefaciens str. C58 (Cereon) Gene: Atu4362: Sugar phosphate isomerases/epimerases	Azorhizobium caulinodans ORS 571	Bartonella quintana str. Toulouse	Bradyrhizobium japonicum USDA 110	Bradyrhizobium sp. BTAi1	Brucella melitensis 16M	Mesorhizobium loti MAFF303099 Gene: mll1509: Sugar phosphate isomerases/epimerases	Mesorhizobium sp. BNC1	Nitrobacter winogradskyi Nb-255	Rhizobium etli CFN 42 Gene: RHE_PB00116: Sugar phosphate isomerases/epimerases	Rhizobium leguminosarum bv. viciae 3841 Gene: pRL90238: Sugar phosphate isomerases/epimerases	Rhizobium sp. NGR234 Gene: NGR_b15580: Sugar phosphate isomerases/epimerases	Rhodopseudomonas palustris CGA009	Sinorhizobium meliloti 1021 Gene: SMb21596: Sugar phosphate isomerases/epimerases	Xanthobacter autotrophicus Py2	Sugar phosphate isomerases/epimerases
SMb21595	Agrobacterium tumefaciens str. C58 (Cereon) Gene: Atu4361: Sugar ABC transporter, periplasmic sugar-binding protein	Azorhizobium caulinodans ORS 571	Bartonella quintana str. Toulouse	Bradyrhizobium japonicum USDA 110	Bradyrhizobium sp. BTAi1	Brucella melitensis 16M	Mesorhizobium loti MAFF303099	Mesorhizobium sp. BNC1	Nitrobacter winogradskyi Nb-255	Rhizobium etli CFN 42 Gene: RHE_PB00115: Sugar ABC transporter, periplasmic sugar-binding protein	Rhizobium leguminosarum bv. viciae 3841 Gene: pRL90237: Sugar ABC transporter, periplasmic sugar-binding protein	Rhizobium sp. NGR234 Gene: NGR_b15570: Sugar ABC transporter, periplasmic sugar-binding protein	Rhodopseudomonas palustris CGA009	Sinorhizobium meliloti 1021 Gene: SMb21595: Sugar ABC transporter, periplasmic sugar-binding protein	Xanthobacter autotrophicus Py2	Sugar ABC transporter, periplasmic sugar-binding protein
SMb21594	Agrobacterium tumefaciens str. C58 (Cereon) Gene: Atu4360: Sugar ABC transporter, membrane spanning protein	Azorhizobium caulinodans ORS 571	Bartonella quintana str. Toulouse	Bradyrhizobium japonicum USDA 110	Bradyrhizobium sp. BTAi1	Brucella melitensis 16M	Mesorhizobium loti MAFF303099	Mesorhizobium sp. BNC1	Nitrobacter winogradskyi Nb-255	Rhizobium etli CFN 42 Gene: RHE_PB00114: Sugar ABC transporter, membrane spanning protein	Rhizobium leguminosarum bv. viciae 3841 Gene: pRL90235: Sugar ABC transporter, membrane spanning protein	Rhizobium sp. NGR234 Gene: NGR_b15560: Sugar ABC transporter, membrane spanning protein	Rhodopseudomonas palustris CGA009	Sinorhizobium meliloti 1021 Gene: SMb21594: Sugar ABC transporter, membrane spanning protein	Xanthobacter autotrophicus Py2	Sugar ABC transporter, membrane spanning protein
SMb21593	Agrobacterium tumefaciens str. C58 (Cereon) Gene: Atu4359: Sugar ABC transporter, inner membrane protein	Azorhizobium caulinodans ORS 571	Bartonella quintana str. Toulouse	Bradyrhizobium japonicum USDA 110	Bradyrhizobium sp. BTAi1	Brucella melitensis 16M	Mesorhizobium loti MAFF303099	Mesorhizobium sp. BNC1	Nitrobacter winogradskyi Nb-255	Rhizobium etli CFN 42 Gene: RHE_PB00113: Sugar ABC transporter, inner membrane protein	Rhizobium leguminosarum bv. viciae 3841 Gene: pRL90234: Sugar ABC transporter, inner membrane protein	Rhizobium sp. NGR234 Gene: NGR_b15550: Sugar ABC transporter, inner membrane protein	Rhodopseudomonas palustris CGA009	Sinorhizobium meliloti 1021 Gene: SMb21593: Sugar ABC transporter, inner membrane protein	Xanthobacter autotrophicus Py2	Sugar ABC transporter, inner membrane protein
SMb21592	Agrobacterium tumefaciens str. C58 (Cereon) Gene: Atu4358: Sugar ABC transporter, ATP-binding protein	Azorhizobium caulinodans ORS 571	Bartonella quintana str. Toulouse	Bradyrhizobium japonicum USDA 110	Bradyrhizobium sp. BTAi1	Brucella melitensis 16M	Mesorhizobium loti MAFF303099	Mesorhizobium sp. BNC1	Nitrobacter winogradskyi Nb-255	Rhizobium etli CFN 42 Gene: RHE_PB00112: Sugar ABC transporter, ATP-binding protein	Rhizobium leguminosarum bv. viciae 3841 Gene: pRL90233: Sugar ABC transporter, ATP-binding protein	Rhizobium sp. NGR234 Gene: NGR_b15540: Sugar ABC transporter, ATP-binding protein	Rhodopseudomonas palustris CGA009	Sinorhizobium meliloti 1021 Gene: SMb21592: Sugar ABC transporter, ATP-binding protein	Xanthobacter autotrophicus Py2	Sugar ABC transporter, ATP-binding protein

CRON 2.
SMb21598	* Agrobacterium tumefaciens str. C58 (Cereon) Site: position = -96 score = 6.57232 sequence = CGTCGTAAACGTTTACGAGA Gene: Atu4364: Transcriptional regulator for sugar utilization, LacI family	Azorhizobium caulinodans ORS 571	Bartonella quintana str. Toulouse	Bradyrhizobium japonicum USDA 110	Bradyrhizobium sp. BTAi1	Brucella melitensis 16M	* Mesorhizobium loti MAFF303099 Site: position = -121 score = 6.77499 sequence = TTCCGTAAACGTTTACGAGA Site: position = -134 score = 5.44673 sequence = CGCCGTAAACGTTTTCCGTA Gene: mlr1512: Transcriptional regulator for sugar utilization, LacI family	Mesorhizobium sp. BNC1	Nitrobacter winogradskyi Nb-255	* Rhizobium etli CFN 42 Site: position = -91 score = 6.65798 sequence = CTCCGTAAACGTTTACGACT Gene: RHE_PB00118: Transcriptional regulator for sugar utilization, LacI family	* Rhizobium leguminosarum bv. viciae 3841 Site: position = -171 score = 6.65798 sequence = CTCCGTAAACGTTTACGACT Gene: pRL90240: Transcriptional regulator for sugar utilization, LacI family	* Rhizobium sp. NGR234 Site: position = -63 score = 6.7696 sequence = GTCCGTAAACGTTTACGGAA Gene: NGR_b15600: Transcriptional regulator for sugar utilization, LacI family	Rhodopseudomonas palustris CGA009	* Sinorhizobium meliloti 1021 Site: position = -195 score = 6.70363 sequence = CACCGTAAACGTTTACGGAA Gene: SMb21598: Transcriptional regulator for sugar utilization, LacI family	Xanthobacter autotrophicus Py2	Transcriptional regulator for sugar utilization, LacI family

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

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Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulog SMb21598 - Rhizobiales

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --