Regulog IscR2 - Rhodospirillales

Properties
Regulator type:	Transcription factor
Regulator family:	Rrf2
Regulation mode:	activator (repressor)
Biological process:	Iron-sulfur cluster biogenesis
Effector:	Iron-sulfur cluster redox state
Phylum:	Proteobacteria
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 7 sites [see more]

Member of regulog collections

By trascription factor - IscR
By taxonomy - Rhodospirillales
By TF family - Rrf2
By effector - Iron-sulfur cluster redox state
By pathway - Iron-sulfur cluster biogenesis

Statistics of regulated genes
Genome	Genes	Operons
Acetobacter pasteurianus IFO 3283-01	8	1
Azospirillum sp. B510	8	1
Gluconacetobacter diazotrophicus PAl 5	8	1
Gluconobacter oxydans 621H	6	1
Granulibacter bethesdensis CGDNIH1	8	1
Magnetospirillum magneticum AMB-1
Magnetospirillum magnetotacticum MS-1
Rhodospirillum centenum SW	8	1
Rhodospirillum rubrum ATCC 11170	7	1

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes										Function

CRON 1.
iscR2	* Acetobacter pasteurianus IFO 3283-01 Site: position = -42 score = 6.22146 sequence = AAACAGGACCGCTCAGGTCTTTAAT Gene: APA01_16630: Iron-sulfur cluster regulator IscR	* Azospirillum sp. B510 Site: position = -54 score = 7.09745 sequence = AATCAGGACTAAATTGGTCCTGTAT Gene: AZL_c04260: Iron-sulfur cluster regulator IscR	* Gluconacetobacter diazotrophicus PAl 5 Site: position = -77 score = 7.03362 sequence = AATCAGGACTGATTTGGTCCGTTAT Gene: Gdia_3308: Iron-sulfur cluster regulator IscR	* Gluconobacter oxydans 621H Site: position = -51 score = 6.30655 sequence = AATCAGGACTTAGCAAGTCTTGAAT Gene: GOX0099: Iron-sulfur cluster regulator IscR	* Granulibacter bethesdensis CGDNIH1 Site: position = -27 score = 6.4646 sequence = AAACAGGACTTAATTGGTCCAGTTA Gene: GbCGDNIH1_1326: Iron-sulfur cluster regulator IscR	Magnetospirillum magneticum AMB-1	Magnetospirillum magnetotacticum MS-1	* Rhodospirillum centenum SW Site: position = -81 score = 5.75879 sequence = AATGTGTACCAGTTTGGTCCGATTT Gene: RC1_0494: Iron-sulfur cluster regulator IscR	* Rhodospirillum rubrum ATCC 11170 Site: position = -45 score = 5.72666 sequence = AAAGAGTACCAATTTAGTCCTGATA Gene: Rru_A2574: Iron-sulfur cluster regulator IscR	Iron-sulfur cluster regulator IscR
sufB	Acetobacter pasteurianus IFO 3283-01 Gene: APA01_16620: Iron-sulfur cluster assembly protein SufB	Azospirillum sp. B510 Gene: AZL_c04270: Iron-sulfur cluster assembly protein SufB	Gluconacetobacter diazotrophicus PAl 5 Gene: Gdia_3309: Iron-sulfur cluster assembly protein SufB	Gluconobacter oxydans 621H Gene: GOX0098: Iron-sulfur cluster assembly protein SufB	Granulibacter bethesdensis CGDNIH1 Gene: GbCGDNIH1_1325: Iron-sulfur cluster assembly protein SufB	Magnetospirillum magneticum AMB-1	Magnetospirillum magnetotacticum MS-1	Rhodospirillum centenum SW Gene: RC1_0493: Iron-sulfur cluster assembly protein SufB	Rhodospirillum rubrum ATCC 11170 Gene: Rru_A2573: Iron-sulfur cluster assembly protein SufB	Iron-sulfur cluster assembly protein SufB
sufC	Acetobacter pasteurianus IFO 3283-01 Gene: APA01_16610: Iron-sulfur cluster assembly ATPase protein SufC	Azospirillum sp. B510 Gene: AZL_c04280: Iron-sulfur cluster assembly ATPase protein SufC	Gluconacetobacter diazotrophicus PAl 5 Gene: Gdia_3310: Iron-sulfur cluster assembly ATPase protein SufC	Gluconobacter oxydans 621H Gene: GOX0097: Iron-sulfur cluster assembly ATPase protein SufC	Granulibacter bethesdensis CGDNIH1 Gene: GbCGDNIH1_1324: Iron-sulfur cluster assembly ATPase protein SufC	Magnetospirillum magneticum AMB-1	Magnetospirillum magnetotacticum MS-1	Rhodospirillum centenum SW Gene: RC1_0492: Iron-sulfur cluster assembly ATPase protein SufC	Rhodospirillum rubrum ATCC 11170 Gene: Rru_A2572: Iron-sulfur cluster assembly ATPase protein SufC	Iron-sulfur cluster assembly ATPase protein SufC
sufD	Acetobacter pasteurianus IFO 3283-01 Gene: APA01_16600: Iron-sulfur (Fe-S) assembly protein SufD	Azospirillum sp. B510 Gene: AZL_c04290: Iron-sulfur (Fe-S) assembly protein SufD	Gluconacetobacter diazotrophicus PAl 5 Gene: Gdia_3311: Iron-sulfur (Fe-S) assembly protein SufD	Gluconobacter oxydans 621H Gene: GOX0096: Iron-sulfur (Fe-S) assembly protein SufD	Granulibacter bethesdensis CGDNIH1 Gene: GbCGDNIH1_1323: Iron-sulfur (Fe-S) assembly protein SufD	Magnetospirillum magneticum AMB-1	Magnetospirillum magnetotacticum MS-1	Rhodospirillum centenum SW Gene: RC1_0491: Iron-sulfur (Fe-S) assembly protein SufD	Rhodospirillum rubrum ATCC 11170 Gene: Rru_A2571: Iron-sulfur (Fe-S) assembly protein SufD	Iron-sulfur (Fe-S) assembly protein SufD
sufS	Acetobacter pasteurianus IFO 3283-01 Gene: APA01_16590: cysteine desulfurase SufS	Azospirillum sp. B510 Gene: AZL_c04300: cysteine desulfurase SufS	Gluconacetobacter diazotrophicus PAl 5 Gene: Gdia_3312: cysteine desulfurase SufS	Gluconobacter oxydans 621H Gene: GOX0095: cysteine desulfurase SufS	Granulibacter bethesdensis CGDNIH1 Gene: GbCGDNIH1_1322: cysteine desulfurase SufS	Magnetospirillum magneticum AMB-1	Magnetospirillum magnetotacticum MS-1	Rhodospirillum centenum SW Gene: RC1_0490: cysteine desulfurase SufS	Rhodospirillum rubrum ATCC 11170 Gene: Rru_A2570: cysteine desulfurase SufS	cysteine desulfurase SufS
sufE2	Acetobacter pasteurianus IFO 3283-01 Gene: APA01_16580: Putative iron-sulfur cluster assembly scaffold protein for SUF system, SufE2	Azospirillum sp. B510 Gene: AZL_c04310: Putative iron-sulfur cluster assembly scaffold protein for SUF system, SufE2	Gluconacetobacter diazotrophicus PAl 5 Gene: Gdia_3313: Putative iron-sulfur cluster assembly scaffold protein for SUF system, SufE2	Gluconobacter oxydans 621H	Granulibacter bethesdensis CGDNIH1 Gene: GbCGDNIH1_1321: Putative iron-sulfur cluster assembly scaffold protein for SUF system, SufE2	Magnetospirillum magneticum AMB-1	Magnetospirillum magnetotacticum MS-1	Rhodospirillum centenum SW Gene: RC1_0489: Putative iron-sulfur cluster assembly scaffold protein for SUF system, SufE2	Rhodospirillum rubrum ATCC 11170 Gene: Rru_A0963: Putative iron-sulfur cluster assembly scaffold protein for SUF system, SufE2	Putative iron-sulfur cluster assembly scaffold protein for SUF system, SufE2
sufT	Acetobacter pasteurianus IFO 3283-01 Gene: APA01_16570: Iron sulfur cluster assembly protein SufT	Azospirillum sp. B510 Gene: AZL_c04320: Iron sulfur cluster assembly protein SufT	Gluconacetobacter diazotrophicus PAl 5 Gene: Gdia_3314: Iron sulfur cluster assembly protein SufT	Gluconobacter oxydans 621H Gene: GOX0094: Iron sulfur cluster assembly protein SufT	Granulibacter bethesdensis CGDNIH1 Gene: GbCGDNIH1_1320: Iron sulfur cluster assembly protein SufT	Magnetospirillum magneticum AMB-1	Magnetospirillum magnetotacticum MS-1	Rhodospirillum centenum SW Gene: RC1_0488: Iron sulfur cluster assembly protein SufT	Rhodospirillum rubrum ATCC 11170 Gene: Rru_A2569: Iron sulfur cluster assembly protein SufT	Iron sulfur cluster assembly protein SufT
sufA	Acetobacter pasteurianus IFO 3283-01 Gene: APA01_16560: Iron binding protein SufA for iron-sulfur cluster assembly	Azospirillum sp. B510 Gene: AZL_c04330: Iron binding protein SufA for iron-sulfur cluster assembly	Gluconacetobacter diazotrophicus PAl 5 Gene: Gdia_3315: Iron binding protein SufA for iron-sulfur cluster assembly	Gluconobacter oxydans 621H	Granulibacter bethesdensis CGDNIH1 Gene: GbCGDNIH1_1319: Iron binding protein SufA for iron-sulfur cluster assembly	Magnetospirillum magneticum AMB-1	Magnetospirillum magnetotacticum MS-1	Rhodospirillum centenum SW Gene: RC1_0487: Iron binding protein SufA for iron-sulfur cluster assembly	Rhodospirillum rubrum ATCC 11170 Gene: Rru_A2568: Iron binding protein SufA for iron-sulfur cluster assembly	Iron binding protein SufA for iron-sulfur cluster assembly

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

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	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulog IscR2 - Rhodospirillales

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --