Regulog IscR - Caulobacterales

Properties
Regulator type:	Transcription factor
Regulator family:	Rrf2
Regulation mode:	activator (repressor)
Biological process:	Iron-sulfur cluster biogenesis
Effector:	Iron-sulfur cluster redox state
Phylum:	Proteobacteria
Visualization:
	Allows to visualize regulog content in the context of metabolic pathways

Built upon 4 sites [see more]

Member of regulog collections

By taxonomy - Caulobacterales
By trascription factor - IscR
By TF family - Rrf2
By effector - Iron-sulfur cluster redox state
By pathway - Iron-sulfur cluster biogenesis

Statistics of regulated genes
Genome	Genes	Operons
Caulobacter crescentus CB15	1	1
Caulobacter segnis ATCC 21756	8	1
Caulobacter sp. K31	10	1
Phenylobacterium zucineum HLK1	8	1

Clusters of co-Regulated Orthologous operoNs (CRONs)
Genes					Function

CRON 1.
iscR	* Caulobacter crescentus CB15 Site: position = -128 score = 8.40483 sequence = ATACTTGACCGCCGCGCTTGGTCTT Gene: CC1866: Iron-sulfur cluster regulator IscR	* Caulobacter segnis ATCC 21756 Site: position = -127 score = 8.40483 sequence = ATACTTGACCGCCGCGCTTGGTCTT Gene: Cseg_2153: Iron-sulfur cluster regulator IscR	* Caulobacter sp. K31 Site: position = -137 score = 8.40483 sequence = ATACTTGACCGCTGCGCTTGGTCTT Gene: Caul_2586: Iron-sulfur cluster regulator IscR	* Phenylobacterium zucineum HLK1 Site: position = -138 score = 8.07733 sequence = ATACTTGACTGCTGCGCTAGGTCTT Gene: PHZ_c1722: Iron-sulfur cluster regulator IscR	Iron-sulfur cluster regulator IscR
iscS	Caulobacter crescentus CB15 Gene: CC1865: Cysteine desulfurase (EC 2.8.1.7), IscS subfamily	Caulobacter segnis ATCC 21756 Gene: Cseg_2152: Cysteine desulfurase (EC 2.8.1.7), IscS subfamily	Caulobacter sp. K31 Gene: Caul_2587: Cysteine desulfurase (EC 2.8.1.7), IscS subfamily	Phenylobacterium zucineum HLK1 Gene: PHZ_c1721: Cysteine desulfurase (EC 2.8.1.7), IscS subfamily	Cysteine desulfurase (EC 2.8.1.7), IscS subfamily
sufB	Caulobacter crescentus CB15 Gene: CC1864: Iron-sulfur cluster assembly protein SufB	Caulobacter segnis ATCC 21756 Gene: Cseg_2151: Iron-sulfur cluster assembly protein SufB	Caulobacter sp. K31 Gene: Caul_2588: Iron-sulfur cluster assembly protein SufB	Phenylobacterium zucineum HLK1 Gene: PHZ_c1720: Iron-sulfur cluster assembly protein SufB	Iron-sulfur cluster assembly protein SufB
Caul_2589	Caulobacter crescentus CB15	Caulobacter segnis ATCC 21756	Caulobacter sp. K31 Gene: Caul_2589: Hypothetical protein	Phenylobacterium zucineum HLK1	Hypothetical protein
Caul_2590	Caulobacter crescentus CB15	Caulobacter segnis ATCC 21756	Caulobacter sp. K31 Gene: Caul_2590: Hypothetical protein	Phenylobacterium zucineum HLK1	Hypothetical protein
sufC	Caulobacter crescentus CB15 Gene: CC1862: Iron-sulfur cluster assembly ATPase protein SufC	Caulobacter segnis ATCC 21756 Gene: Cseg_2150: Iron-sulfur cluster assembly ATPase protein SufC	Caulobacter sp. K31 Gene: Caul_2591: Iron-sulfur cluster assembly ATPase protein SufC	Phenylobacterium zucineum HLK1 Gene: PHZ_c1719: Iron-sulfur cluster assembly ATPase protein SufC	Iron-sulfur cluster assembly ATPase protein SufC
sufD	Caulobacter crescentus CB15 Gene: CC1861: Iron-sulfur cluster assembly protein SufD	Caulobacter segnis ATCC 21756 Gene: Cseg_2149: Iron-sulfur cluster assembly protein SufD	Caulobacter sp. K31 Gene: Caul_2592: Iron-sulfur cluster assembly protein SufD	Phenylobacterium zucineum HLK1 Gene: PHZ_c1718: Iron-sulfur cluster assembly protein SufD	Iron-sulfur cluster assembly protein SufD
sufS	Caulobacter crescentus CB15 Gene: CC1860: Cysteine desulfurase (EC 2.8.1.7), SufS subfamily	Caulobacter segnis ATCC 21756 Gene: Cseg_2148: Cysteine desulfurase (EC 2.8.1.7), SufS subfamily	Caulobacter sp. K31 Gene: Caul_2593: Cysteine desulfurase (EC 2.8.1.7), SufS subfamily	Phenylobacterium zucineum HLK1 Gene: PHZ_c1717: Cysteine desulfurase (EC 2.8.1.7), SufS subfamily	Cysteine desulfurase (EC 2.8.1.7), SufS subfamily
sufT	Caulobacter crescentus CB15 Gene: CC1859: Iron sulfur cluster assembly protein SufT	Caulobacter segnis ATCC 21756 Gene: Cseg_2147: Iron sulfur cluster assembly protein SufT	Caulobacter sp. K31 Gene: Caul_2594: Iron sulfur cluster assembly protein SufT	Phenylobacterium zucineum HLK1 Gene: PHZ_c1716: Iron sulfur cluster assembly protein SufT	Iron sulfur cluster assembly protein SufT
sufA	Caulobacter crescentus CB15 Gene: CC1858: Iron binding protein SufA for iron-sulfur cluster assembly	Caulobacter segnis ATCC 21756 Gene: Cseg_2146: Iron binding protein SufA for iron-sulfur cluster assembly	Caulobacter sp. K31 Gene: Caul_2595: Iron binding protein SufA for iron-sulfur cluster assembly	Phenylobacterium zucineum HLK1 Gene: PHZ_c1715: Iron binding protein SufA for iron-sulfur cluster assembly	Iron binding protein SufA for iron-sulfur cluster assembly

Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.

Red color - the gene is in non-regulated operon.

Gray color - the orthologous gene is absent.

The star symbol - the TFBS is located in upstream region of this gene.

The number - the numeber of homologs (shown only if it is greater than one).

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Regulog IscR - Caulobacterales

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --