Regulog LldR - Rhodospirillales
| Regulator type: | Transcription factor |
| Regulator family: | GntR/Others |
| Regulation mode: | repressor |
| Biological process: | Lactate utilization |
| Effector: | L-lactate |
| Phylum: | Proteobacteria/alpha |
| Visualization: | |
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Allows to visualize regulog content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Rhodospirillales
- By trascription factor - LldR
- By TF family - GntR/Others
- By effector - L-lactate
- By pathway - Lactate utilization
| Genome | Genes | Operons |
|---|---|---|
| Rhodospirillum rubrum ATCC 11170 | 6 | 2 |
| Magnetospirillum magnetotacticum MS-1 | 4 | 4 |
| Magnetospirillum magneticum AMB-1 | 6 | 3 |
| Azospirillum sp. B510 | 6 | 2 |
| Rhodospirillum centenum SW | ||
| Gluconacetobacter diazotrophicus PAl 5 | ||
| Acetobacter pasteurianus IFO 3283-01 | ||
| Gluconobacter oxydans 621H | ||
| Granulibacter bethesdensis CGDNIH1 |
| Genes | Function | |||||||||
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| CRON 1. | ||||||||||
| lldR |
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Rhodospirillum rubrum ATCC 11170 Site: position = -164 score = 5.92347 sequence = TTGGTCAAGAAGTATGACCAC Gene: Rru_A1414: Lactate-responsive regulator LldR, GntR family |
*2
Magnetospirillum magnetotacticum MS-1 Site: position = -105 score = 5.62538 sequence = GTGGTAACAAAATTTGACCAG Gene: Magn03010148: Lactate-responsive regulator LldR, GntR family Site: position = -118 score = 4.71392 sequence = GTGGATAAAACTTTTTACCAC Gene: Magn03010985: Lactate-responsive regulator LldR, GntR family |
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Magnetospirillum magneticum AMB-1 Site: position = -118 score = 4.28949 sequence = CTGGATAAAACTTTTTACCAC Gene: amb0238: Lactate-responsive regulator LldR, GntR family |
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Azospirillum sp. B510 Site: position = -194 score = 5.07057 sequence = TTGGATAAATTATTTTACCAG Gene: AZL_e03820: Lactate-responsive regulator LldR, GntR family |
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Lactate-responsive regulator LldR, GntR family |
| CRON 2. | ||||||||||
| lldP |
Gene: Rru_A1409: L-lactate permease |
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Magnetospirillum magnetotacticum MS-1 Site: position = -96 score = 5.31238 sequence = CTGGTCAAATTTTGTTACCAC Gene: Magn03010149: L-lactate permease |
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Magnetospirillum magneticum AMB-1 Site: position = -197 score = 6.28012 sequence = GTGGTAAAATTATTTTGCCAA Gene: amb4128: L-lactate permease |
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Azospirillum sp. B510 Site: position = -333 score = 5.24461 sequence = CTGGTAAAATAATTTATCCAA Gene: AZL_e03830: L-lactate permease |
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L-lactate permease |
| dld |
Gene: Rru_A1410: D-lactate dehydrogenase |
2
Magnetospirillum magnetotacticum MS-1 Gene: Magn03000069: D-lactate dehydrogenase Gene: Magn03009925: D-lactate dehydrogenase |
Gene: amb4132: D-lactate dehydrogenase |
Gene: AZL_e03840: D-lactate dehydrogenase |
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D-lactate dehydrogenase |
| lldE |
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Rhodospirillum rubrum ATCC 11170 Site: position = -241 score = 6.04235 sequence = GTGGTCATACTTCTTGACCAA Gene: Rru_A1413: L-lactate dehydrogenase, Fe-S oxidoreductase subunit LldE |
*2
Magnetospirillum magnetotacticum MS-1 Gene: Magn03009929: L-lactate dehydrogenase, Fe-S oxidoreductase subunit LldE Site: position = -117 score = 5.80054 sequence = TTGGCAAAATAATTTTACCAC Gene: Magn03010147: L-lactate dehydrogenase, Fe-S oxidoreductase subunit LldE |
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Magnetospirillum magneticum AMB-1 Site: position = -50 score = 5.80054 sequence = TTGGCAAAATAATTTTACCAC Gene: amb4129: L-lactate dehydrogenase, Fe-S oxidoreductase subunit LldE |
Gene: AZL_e03850: L-lactate dehydrogenase, Fe-S oxidoreductase subunit LldE |
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L-lactate dehydrogenase, Fe-S oxidoreductase subunit LldE |
| lldF |
Gene: Rru_A1412: L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit LldF |
Gene: Magn03009928: L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit LldF |
Gene: amb4130: L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit LldF |
Gene: AZL_e03860: L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit LldF |
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L-lactate dehydrogenase, Iron-sulfur cluster-binding subunit LldF |
| lldG |
Gene: Rru_A1411: L-lactate dehydrogenase, subunit LldG |
Gene: Magn03009927: L-lactate dehydrogenase, subunit LldG |
Gene: amb4131: L-lactate dehydrogenase, subunit LldG |
Gene: AZL_e03870: L-lactate dehydrogenase, subunit LldG |
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L-lactate dehydrogenase, subunit LldG |
Bluish color - the gene is in regulated operon. Different regulated operons are shown in different shades of blue.
Red color - the gene is in non-regulated operon.
Gray color - the orthologous gene is absent.
The star symbol - the TFBS is located in upstream region of this gene.
The number - the numeber of homologs (shown only if it is greater than one).
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |