Propagation of Fur regulog to Shewanella baltica OS223
| Source regulog: | Fur - Shewanellaceae |
| Regulator type: | Transcription factor |
| Regulator family: | FUR |
| Regulation mode: | repressor (activator) |
| Biological process: | Iron homeostasis |
| Effector: | Iron ion, (Fe2+) |
| Phylum: | Proteobacteria |
| Propagated regulon: | |
| Target genome | Shewanella baltica OS223 |
| Orthologous TF(s) | Sbal223_1842 |
| Regulated genes | 36 |
| Locus tag | Position | Score | Sequence | |
|---|---|---|---|---|
|
Position: -131
Score: 5.7 Sequence: AAATGAAAATCATTTTTATCA
Locus tag: Sbal223_0136
|
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| Sbal223_0136 | -131 | 5.7 | AAATGAAAATCATTTTTATCA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: ftn | ||||
| Ortholog function: Ferritin, Ftn | ||||
| Shewanella oneidensis MR-1 | SO0139 | -133 | 5.7 | AAATGAAAATCATTTTTATCA |
| Shewanella putrefaciens CN-32 | Sputcn32_0132 | -131 | 5.7 | AAATGAAAATCATTTTTATCA |
| Shewanella sp W3-18-1 | Sputw3181_3940 | -131 | 5.7 | AAATGAAAATCATTTTTATCA |
| Shewanella sp ANA-3 | Shewana3_0132 | -132 | 5.7 | AAATGAAAATCATTTTTATCA |
| Shewanella sp MR-4 | Shewmr4_0133 | -132 | 5.4 | AAATGCAAATCATTTTTATCA |
| Shewanella sp MR-7 | Shewmr7_0127 | -132 | 5.4 | AAATGCAAATCATTTTTATCA |
| Shewanella baltica OS155 | Sbal_4222 | -131 | 5.7 | AAATGAAAATCATTTTTATCA |
| Shewanella amazonensis SB2B | Sama_0141 | -113 | 5.1 | TAATGATAAGTGTTACTATTT |
| Shewanella loihica PV-4 | Shew_0042 | -381 | 5.4 | TAACGATAATTATTTGCATTT |
| Shewanella pealeana ATCC 700345 | Spea_0129 | -111 | 6 | AAATGAAAACCATTATTATTT |
| Shewanella halifaxensis HAW-EB4 | Shal_4189 | -111 | 6 | AAATGAAAACCATTATTATTT |
| Shewanella piezotolerans WP3 | swp_0167 | -110 | 6 | AAATGAAAACCATTATTATTT |
| Shewanella sediminis HAW-EB3 | Ssed_4374 | -107 | 5.7 | TAATGATAATTATTAGTATTT |
| Shewanella woodyi ATCC 51908 | Swoo_4766 | -176 | 5.7 | TAATGAGAATTATTTGTATTT |
|
Position: -52
Score: 5.9 Sequence: TATTGAAAATTGTTCTCATTT
Locus tag: Sbal223_0219
|
||||
| Sbal223_0219 | -52 | 5.9 | TATTGAAAATTGTTCTCATTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: irgA | ||||
| Ortholog function: TonB-dependent receptor | ||||
| Shewanella oneidensis MR-1 | SO_4523 | -50 | 6.1 | TATTGAAAATTATTATCATTT |
| Shewanella putrefaciens CN-32 | Sputcn32_3503 | -52 | 5.9 | TATTGAAAATTGTTCTCATTT |
| Shewanella sp W3-18-1 | Sputw3181_0403 | -52 | 5.9 | TATTGAAAATTGTTCTCATTT |
| Shewanella sp ANA-3 | Shewana3_3929 | -49 | 6.1 | TATTGAAAATTATTATCATTT |
| Shewanella baltica OS155 | Sbal_0217 | -52 | 5.9 | TATTGAAAATTGTTCTCATTT |
|
Position: -100
Score: 5.6 Sequence: GAATAAAAATCGTTATCATTT
Locus tag: Sbal223_0303
|
||||
| Sbal223_0303 | -100 | 5.6 | GAATAAAAATCGTTATCATTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: SO4423.1 | ||||
| Ortholog function: TonB-dependent ferric achromobactin receptor | ||||
| Shewanella oneidensis MR-1 | SO4423.1 | -98 | 5.4 | TAATAAAAATCGTTACCATTT |
| Shewanella putrefaciens CN-32 | Sputcn32_0401 | -97 | 5.6 | TAACGAAAATCGTTATCATTT |
| Shewanella sp W3-18-1 | Sputw3181_0255 | -97 | 5.6 | TAACGAAAATCGTTATCATTT |
| Shewanella sp ANA-3 | Shewana3_0286 | -98 | 5.5 | CAATAAAAATCGTTATCATTT |
| Shewanella sp MR-4 | Shewmr4_0286 | -98 | 5.5 | CAATAAAAATCGTTATCATTT |
| Shewanella sp MR-7 | Shewmr7_3733 | -98 | 5.5 | CAATAAAAATCGTTATCATTT |
| Shewanella baltica OS155 | Sbal_0298 | -100 | 5.6 | GAATAAAAATCGTTATCATTT |
| Shewanella frigidimarina NCIMB 400 | Sfri_0392 | -54 | 5.9 | TAATGATAATGAATATCATTA |
| Shewanella amazonensis SB2B | Sama_1394 | -54 | 5 | CATTGAGAGTAATTATCATTA |
| Shewanella loihica PV-4 | Shew_1688 | -72 | 4.9 | ATATGATAATCTATATCATTC |
| Shewanella pealeana ATCC 700345 | Spea_0977 | -108 | 5.3 | AAACACTAATCATTATCATTT |
| Shewanella piezotolerans WP3 | swp_1134 | -108 | 5.2 | CAACAATAATCATTATCATTT |
| Shewanella sediminis HAW-EB3 | Ssed_1496 | -51 | 4.9 | AATCGAGAATGGTTATCATCC |
| Shewanella woodyi ATCC 51908 | Swoo_0587 | -62 | 5.9 | TAATGGGAATAATTATCATTT |
|
Position: -108
Score: 4.9 Sequence: AAATGATAATAGTTATTGATC
Locus tag: Sbal223_0740
|
||||
| Sbal223_0740 | -108 | 4.9 | AAATGATAATAGTTATTGATC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: SO3914 | ||||
| Ortholog function: TonB-dependent siderophore receptor | ||||
| Shewanella oneidensis MR-1 | SO3914 | -108 | 5.1 | AAATGATAATAATTATTGATC |
| Shewanella sp ANA-3 | Shewana3_0716 | -107 | 5.5 | AAATGATAATAATTATTGATT |
| Shewanella sp MR-4 | Shewmr4_3245 | -106 | 5.5 | AAATGATAATAATTATTGATT |
| Shewanella sp MR-7 | Shewmr7_0697 | -106 | 4.8 | AAATGATAATAATAATTGATT |
| Shewanella baltica OS155 | Sbal_3635 | -108 | 4.9 | AAATGATAATAGTTATTGATC |
|
Position: -129
Score: 5.4 Sequence: ATTTGATAATCGATCTCATTT
Locus tag: Sbal223_1112
|
||||
| Sbal223_1112 | -129 | 5.4 | ATTTGATAATCGATCTCATTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: SO1188 | ||||
| Ortholog function: Inner membrane protein with PepSY TM helix | ||||
| Shewanella oneidensis MR-1 | SO1188 | -185 | 5.4 | TTTTGATAATAAATATCATTT |
| Shewanella putrefaciens CN-32 | Sputcn32_2850 | -93 | 5.2 | GTTTGATAATAAATATCATTT |
| Shewanella sp W3-18-1 | Sputw3181_1054 | -93 | 5.2 | GTTTGATAATAAATATCATTT |
| Shewanella sp ANA-3 | Shewana3_1014 | -181 | 5.6 | TGTTGATAATAAATATCATTT |
| Shewanella sp MR-4 | Shewmr4_1010 | -181 | 5.6 | TGTTGATAATAAATATCATTT |
| Shewanella sp MR-7 | Shewmr7_1075 | -181 | 5.6 | TGTTGATAATAAATATCATTT |
| Shewanella baltica OS155 | Sbal_3255 | -45 | 5.4 | ATTTGATAATCGATCTCATTT |
| Shewanella denitrificans OS217 | Sden_2152 | -58 | 5.8 | TATTGAGATTCATTATCATTT |
| Shewanella amazonensis SB2B | Sama_2808 | -73 | 4.8 | TGGTGAGAATTACTCTCAATT |
| Shewanella piezotolerans WP3 | swp_3069 | -102 | 4.3 | TGATCATAATTGTTTTAAATC |
|
Position: -61
Score: 5.3 Sequence: TTATGATAATGAATATTATTT
Locus tag: Sbal223_1322
|
||||
| Sbal223_1322 | -61 | 5.3 | TTATGATAATGAATATTATTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: Sputcn32_2703 | ||||
| Ortholog function: Cytochrome B561 | ||||
| Shewanella putrefaciens CN-32 | Sputcn32_2703 | -60 | 4.6 | TTATGATAATGGATATTGTTT |
| Shewanella sp W3-18-1 | Sputw3181_1308 | -60 | 4.6 | TTATGATAATGGATATTGTTT |
| Shewanella sp ANA-3 | Shewana3_1178 | -59 | 5 | TTATGATAATGACTATTATTT |
| Shewanella sp MR-4 | Shewmr4_1177 | -59 | 5 | TTATGATAATGACTATTATTT |
| Shewanella sp MR-7 | Shewmr7_1248 | -59 | 5 | TTATGATAATGACTATTATTT |
| Shewanella baltica OS155 | Sbal_3042 | -61 | 5.3 | TTATGATAATGAATATTATTT |
| Shewanella amazonensis SB2B | Sama_0949 | -38 | 5.4 | AGATGAAAACCATTCTCGTTA |
|
Position: -41
Score: 6 Sequence: AGATGATAATGATTATCAATT
Locus tag: Sbal223_1346
|
||||
| Sbal223_1346 | -41 | 6 | AGATGATAATGATTATCAATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: SO3344 | ||||
| Ortholog function: Hypothetical inner membrane protein | ||||
| Shewanella oneidensis MR-1 | SO3344 | -44 | 6 | AAATGATAATGATTATCAGTT |
| Shewanella putrefaciens CN-32 | Sputcn32_2679 | -40 | 6 | AGATGATAATGATTATCAATT |
| Shewanella sp W3-18-1 | Sputw3181_1332 | -40 | 6 | AGATGATAATGATTATCAATT |
| Shewanella sp ANA-3 | Shewana3_1202 | -44 | 6.1 | AAATGATAATGATTATCACTT |
| Shewanella sp MR-4 | Shewmr4_1201 | -44 | 6.1 | AAATGATAATGATTATCACTT |
| Shewanella sp MR-7 | Shewmr7_1272 | -44 | 6.1 | AAATGATAATGATTATCACTT |
| Shewanella baltica OS155 | Sbal_3017 | -41 | 6 | AGATGATAATGATTATCAATT |
| Shewanella loihica PV-4 | Shew_1146 | -43 | 6.3 | AAATGATAATGATTATCAATT |
| Shewanella pealeana ATCC 700345 | Spea_1134 | -33 | 6.1 | TAATGATAATGATTATCAATT |
| Shewanella halifaxensis HAW-EB4 | Shal_1179 | -44 | 6.1 | AATTGATAATGATTATCAATT |
| Shewanella piezotolerans WP3 | swp_3598 | -43 | 6.1 | TAATGATAATGATTATCAATT |
| Shewanella sediminis HAW-EB3 | Ssed_1239 | -41 | 5.7 | TAATGATAATGATTATCAATC |
| Shewanella woodyi ATCC 51908 | Swoo_1339 | -42 | 6 | AAATGATAATGATTATCAGTT |
|
Position: -56
Score: 5.2 Sequence: AATTGCGAATAGTTCTCAACA
Locus tag: Sbal223_1622
|
||||
| Sbal223_1622 | -56 | 5.2 | AATTGCGAATAGTTCTCAACA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: SO3062 | ||||
| Ortholog function: Hypothetical inner membrane protein | ||||
| Shewanella oneidensis MR-1 | SO3062 | -67 | 5.5 | TGTTGAGAACAATTCTCATCT |
| Shewanella putrefaciens CN-32 | Sputcn32_2436 | -55 | 5.5 | AATTGAGAACCATTCTCAACA |
| Shewanella sp ANA-3 | Shewana3_1485 | -67 | 5.8 | AGTTGAGAATAATTCTCATCT |
| Shewanella sp MR-4 | Shewmr4_1432 | -66 | 6 | AATTGAGAATGATTCTCATCT |
| Shewanella sp MR-7 | Shewmr7_1497 | -66 | 5.8 | AGTTGAGAATTATTCTCATCT |
| Shewanella baltica OS155 | Sbal_2737 | -50 | 5.2 | AATTGCGAATAGTTCTCAACA |
|
Position: -233
Score: 5.9 Sequence: AAATGAGAATGGTTTGCATTT
Locus tag: Sbal223_1656
|
||||
| Sbal223_1656 | -233 | 5.9 | AAATGAGAATGGTTTGCATTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: pubA | ||||
| Ortholog function: Putrescine monooxygenase, PubA | ||||
| Shewanella oneidensis MR-1 | SO3030 | -208 | 5.7 | AGATGAGAACGATTTGCATTT |
| Shewanella putrefaciens CN-32 | Sputcn32_2411 | -219 | 6 | AAATGATAACGATTTGCATTT |
| Shewanella sp W3-18-1 | Sputw3181_1597 | -219 | 6 | AAATGATAACGATTTGCATTT |
| Shewanella sp ANA-3 | Shewana3_1510 | -224 | 6.1 | AAATGAGAATGATTTGCATTT |
| Shewanella sp MR-4 | Shewmr4_1454 | -222 | 5.9 | AAATGAGAATGGTTTGCATTT |
| Shewanella sp MR-7 | Shewmr7_1520 | -223 | 5.9 | AAATGAGAATGGTTTGCATTT |
| Shewanella baltica OS155 | Sbal_2708 | -232 | 6.1 | AAATGAGAATGATTTGCATTT |
|
Position: -47
Score: 5.2 Sequence: ATTTAAGAATAATTATCATTC
Locus tag: Sbal223_1935
|
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| Sbal223_1935 | -47 | 5.2 | ATTTAAGAATAATTATCATTC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: Sputcn32_1826 | ||||
| Ortholog function: TonB-dependent receptor | ||||
| Shewanella putrefaciens CN-32 | Sputcn32_1826 | -48 | 5.1 | CATTAAGAATAATTATCATTC |
| Shewanella sp W3-18-1 | Sputw3181_2183 | -48 | 5.1 | CATTAAGAATAATTATCATTC |
| Shewanella sp ANA-3 | Shewana3_1861 | -47 | 5.2 | ATTTAAGAATAATTATCATTC |
| Shewanella sp MR-4 | Shewmr4_1806 | -47 | 5.2 | ATTTAAGAATAATTATCATTC |
| Shewanella sp MR-7 | Shewmr7_2171 | -47 | 5.2 | ATTTAAGAATAATTATCATTC |
| Shewanella baltica OS155 | Sbal_2423 | -47 | 5.2 | ATTTAAGAATAATTATCATTC |
|
Position: -32
Score: 5.1 Sequence: AAATGATATAGATTCTCGTTT
Locus tag: Sbal223_2046
|
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| Sbal223_2046 | -32 | 5.1 | AAATGATATAGATTCTCGTTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: SO2426 | ||||
| Ortholog function: Two component transcriptional regulator, Winged helix family | ||||
| Shewanella oneidensis MR-1 | SO2426 | -2 | 5.6 | AAATGATATTGATTCTCGTTT |
| Shewanella putrefaciens CN-32 | Sputcn32_1941 | -2 | 5.5 | AAATGATATCGATTCTCGTTT |
| Shewanella sp W3-18-1 | Sputw3181_2064 | -2 | 5.5 | AAATGATATCGATTCTCGTTT |
| Shewanella sp ANA-3 | Shewana3_1959 | -32 | 5.6 | AAATGATATTGATTCTCGTTT |
| Shewanella sp MR-4 | Shewmr4_1904 | -32 | 5.6 | AAATGATATTGATTCTCGTTT |
| Shewanella sp MR-7 | Shewmr7_2074 | -32 | 5.6 | AAATGATATTGATTCTCGTTT |
| Shewanella baltica OS155 | Sbal_2050 | -32 | 5.1 | AAATGATATAGATTCTCGTTT |
| Shewanella denitrificans OS217 | Sden_1906 | 10 | 5.6 | TAATGAAAATGGTTATCGTTT |
| Shewanella frigidimarina NCIMB 400 | Sfri_2150 | -32 | 5.6 | TAATGGTAATCGTTATCATTA |
| Shewanella amazonensis SB2B | Sama_1718 | -32 | 4.8 | GAATAACAACCGTTCGCATTT |
| Shewanella loihica PV-4 | Shew_1936 | -31 | 6 | TAATGATAACTATTATCATTA |
| Shewanella pealeana ATCC 700345 | Spea_2236 | -34 | 5.3 | TAATGCGAATTATTCGTATTT |
| Shewanella halifaxensis HAW-EB4 | Shal_2220 | -34 | 5.6 | AAATGAAAATGATTCGCATTG |
| Shewanella piezotolerans WP3 | swp_2595 | -9 | 5.5 | CAATGATAATTGTTCGCATTT |
| Shewanella sediminis HAW-EB3 | Ssed_2316 | -34 | 5.5 | AAATGATAACAGTTCGTATTT |
| Shewanella woodyi ATCC 51908 | Swoo_2294 | -36 | 5.4 | TGTTGATAATTGTTCGCATTT |
|
Position: -64
Score: 5.4 Sequence: TATTGATAACAATTTGCATTA
Locus tag: Sbal223_2122
|
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| Sbal223_2122 | -64 | 5.4 | TATTGATAACAATTTGCATTA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: COG3182 | ||||
| Ortholog function: PepSY-associated TM helix domain-containing protein | ||||
| Shewanella putrefaciens CN-32 | Sputcn32_1842 | -90 | 5.7 | AATTGAAAACAATTATCAATA |
| -64 | 5.2 | TATTGATAACAATTCGTATTA | ||
| Shewanella sp W3-18-1 | Sputw3181_2167 | -90 | 5.7 | AATTGAAAACAATTATCAATA |
| -64 | 5.2 | TATTGATAACAATTCGTATTA | ||
| Shewanella sp ANA-3 | Shewana3_2196 | -66 | 5.5 | TATTGATAACAATTCGCATTA |
| Shewanella sp MR-4 | Shewmr4_2076 | -65 | 5.5 | TATTGATAACAATTCGCATTA |
| Shewanella sp MR-7 | Shewmr7_1899 | -65 | 5.5 | TATTGATAACAATTCGCATTA |
| Shewanella baltica OS155 | Sbal_2134 | -64 | 5.4 | TATTGATAACAATTTGCATTA |
| Shewanella frigidimarina NCIMB 400 | Sfri_2548 | -184 | 5.6 | TATTGCTAATGATTATCATTA |
| -107 | 5.5 | AATTGATAATAATTATCACTC | ||
| -80 | 5 | TATTGAGATTCGTTATCAATC | ||
|
Position: -63
Score: 5.1 Sequence: AAATGAAAGTGATTCGCAATA
Locus tag: Sbal223_2124
|
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| Sbal223_2124 | -63 | 5.1 | AAATGAAAGTGATTCGCAATA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: Sputcn32_3863 | ||||
| Ortholog function: TonB-dependent siderophore receptor | ||||
| Shewanella putrefaciens CN-32 | Sputcn32_3863 | -21 | 5.3 | AAATGAAAACTATTCGTAATA |
| Shewanella sp W3-18-1 | Sputw3181_0090 | -21 | 5.3 | AAATGAAAACTATTCGTAATA |
| Shewanella sp ANA-3 | Shewana3_0952 | -63 | 5.2 | AAATGCAAATCGTTCTCAATG |
| Shewanella sp MR-4 | Shewmr4_0950 | -57 | 5.6 | AAATGCAAATCGTTCTCAATA |
| Shewanella sp MR-7 | Shewmr7_0988 | -57 | 5.6 | AAATGCAAATCGTTCTCAATA |
| Shewanella baltica OS155 | Sbal_2136 | -63 | 4.8 | AAATAAAAGTGATTCGCAATA |
|
Position: -339
Score: 5.1 Sequence: AATTGCGAATGGATGTCATTT
Locus tag: Sbal223_2168
|
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| Sbal223_2168 | -339 | 5.1 | AATTGCGAATGGATGTCATTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: SO0448 | ||||
| Ortholog function: Iron-regulated inner membrane protein | ||||
| Shewanella oneidensis MR-1 | SO0448 | -146 | 5.2 | TATTGCGAACTATTCTCATCA |
| Shewanella putrefaciens CN-32 | Sputcn32_3396 | -184 | 5.2 | TATTGCGAATTGTTATCAATA |
| Shewanella sp W3-18-1 | Sputw3181_0547 | -182 | 5.2 | TATTGCGAATTGTTATCAATA |
| Shewanella sp ANA-3 | Shewana3_0446 | -152 | 5.1 | TATTGCGAACTGTTCTCATCA |
| Shewanella sp MR-4 | Shewmr4_0450 | -153 | 4.8 | TATTGCGAACTATTCTCACCA |
| Shewanella sp MR-7 | Shewmr7_3579 | -155 | 4.8 | TATTGCGAACTATTCTCACCA |
| Shewanella denitrificans OS217 | Sden_0619 | -72 | 5.2 | AATTGCAAATCACTCTCATTT |
| Shewanella frigidimarina NCIMB 400 | Sfri_3223 | -102 | 5 | GATTGATAATCGTTGTTATTA |
| Shewanella piezotolerans WP3 | swp_0160 | -456 | 5.3 | AATTGCGAATCATTCACATTT |
|
Position: -63
Score: 5.8 Sequence: TATTGATAACAGTTATCATTT
Locus tag: Sbal223_2211
|
||||
| Sbal223_2211 | -63 | 5.8 | TATTGATAACAGTTATCATTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: Sfri_2008 | ||||
| Ortholog function: Hypothetical protein | ||||
| Shewanella putrefaciens CN-32 | Sputcn32_1997 | -63 | 5.9 | TGTTGATAATAATTATCATTT |
| Shewanella sp MR-4 | Shewmr4_2003 | -59 | 5.7 | TGTTGATAACTATTCTCATTT |
| Shewanella sp MR-7 | Shewmr7_1972 | -59 | 5.7 | TGTTGATAACTATTCTCATTT |
| Shewanella baltica OS155 | Sbal_4484 | -165 | 4.7 | AAATAAAAATAATGATCACAT |
| -63 | 5.6 | TGTTGATAACAGTTATCATTT | ||
| Shewanella baltica OS155 | Sbal_2198 | -165 | 4.7 | AAATAAAAATAATGATCACAT |
| -63 | 5.6 | TGTTGATAACAGTTATCATTT | ||
| Shewanella denitrificans OS217 | Sden_1854 | -36 | 6 | AAATAAAAACCATTCTCATTT |
| Shewanella frigidimarina NCIMB 400 | Sfri_2008 | -116 | 6 | AATTGATAACTATTCTCATTA |
| Shewanella amazonensis SB2B | Sama_1788 | -52 | 6 | ATATGATAACTATTCTCATTT |
| Shewanella pealeana ATCC 700345 | Spea_2212 | -117 | 6.1 | TATTGATAATCATTATCATTT |
| Shewanella halifaxensis HAW-EB4 | Shal_2195 | -62 | 5.9 | TGTTGATAATCATTCTCATTT |
| Shewanella sediminis HAW-EB3 | Ssed_2208 | -64 | 5.8 | CATTGATAATCATTCTCATTT |
| Shewanella woodyi ATCC 51908 | Swoo_2428 | -62 | 5.9 | AGTTGATAACCATTCTCATTT |
|
Position: -46
Score: 5.3 Sequence: AAATGCGAATAATTAGTATTA
Locus tag: Sbal223_2286
|
||||
| Sbal223_2286 | -46 | 5.3 | AAATGCGAATAATTAGTATTA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: SO2039 | ||||
| Ortholog function: Signalling protein with EAL domain | ||||
| Shewanella oneidensis MR-1 | SO2039 | -44 | 5.6 | AAATGCGAATAATTAGCAATT |
| Shewanella putrefaciens CN-32 | Sputcn32_2106 | -48 | 4.9 | AAATGCAAATAATAAGCAATT |
| Shewanella sp W3-18-1 | Sputw3181_1906 | -48 | 4.9 | AAATGCAAATAATAAGCAATT |
| Shewanella sp ANA-3 | Shewana3_2237 | -44 | 5 | AAATGCGAATAATTAGCGATT |
| Shewanella sp MR-4 | Shewmr4_2112 | -42 | 5 | AAATGCGAATAATTAGCGATT |
| Shewanella sp MR-7 | Shewmr7_1862 | -44 | 5.6 | AAATGCGAATAATTAGCAATT |
| Shewanella baltica OS155 | Sbal_2274 | -46 | 5.3 | AAATGCGAATAATTAGTATTA |
| Shewanella baltica OS155 | Sbal_4560 | -46 | 5.3 | AAATGCGAATAATTAGTATTA |
| Shewanella denitrificans OS217 | Sden_1592 | -44 | 5.2 | AAATAGGAATAATTAGCATTA |
| Shewanella amazonensis SB2B | Sama_1896 | -42 | 5.5 | TAATGAGATTTATTTGCATTA |
| Shewanella halifaxensis HAW-EB4 | Shal_1861 | -35 | 5.2 | TAATATAAACAATTATCATTT |
| Shewanella piezotolerans WP3 | swp_2763 | 29 | 5.6 | TAATGTTAATAATTATCATTA |
| Shewanella sediminis HAW-EB3 | Ssed_1968 | -56 | 5 | TAATGTGAATAATTACTATTT |
|
Position: -24
Score: 5.4 Sequence: GACTGATAATAGTTTTCATTT
Locus tag: Sbal223_2701
|
||||
| Sbal223_2701 | -24 | 5.4 | GACTGATAATAGTTTTCATTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: SO2841 | ||||
| Ortholog function: Hypothetical protein | ||||
| Shewanella oneidensis MR-1 | SO2841 | -60 | 5.4 | GACTGATAATAGTTTTCATTT |
| Shewanella putrefaciens CN-32 | Sputcn32_1534 | -59 | 5.6 | GACTGATAATAATTTTCATTT |
| Shewanella sp W3-18-1 | Sputw3181_2565 | -59 | 5.6 | GACTGATAATAATTTTCATTT |
| Shewanella sp ANA-3 | Shewana3_2609 | -71 | 5.6 | GACTGATAATAATTTTCATTT |
| Shewanella sp MR-4 | Shewmr4_2447 | -71 | 5.6 | GACTGATAATAATTTTCATTT |
| Shewanella sp MR-7 | Shewmr7_2517 | -71 | 5.6 | GACTGATAATAATTTTCATTT |
| Shewanella baltica OS155 | Sbal_1657 | -63 | 5.4 | GACTGATAATAGTTTTCATTT |
| Shewanella amazonensis SB2B | Sama_1270 | -60 | 5.4 | GACTGAGAATGGTTTTCATTT |
| Shewanella pealeana ATCC 700345 | Spea_2627 | -104 | 5.5 | GAACGATAATGATTTTCATTT |
| Shewanella halifaxensis HAW-EB4 | Shal_2698 | -103 | 5.8 | TAACGATAATGATTTTCATTT |
| Shewanella piezotolerans WP3 | swp_3175 | -56 | 6.1 | AATTGATAACGATTTTCATTT |
|
Position: -121
Score: 5.4 Sequence: AATTGAAAACTATTATCGTTA
Locus tag: Sbal223_2760
|
||||
| Sbal223_2760 | -121 | 5.4 | AATTGAAAACTATTATCGTTA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: feoA | ||||
| Ortholog function: Ferrous iron transport protein A | ||||
| Shewanella oneidensis MR-1 | SO1783 | -121 | 5.4 | AATTGAAAACTATTATCGTTA |
| Shewanella putrefaciens CN-32 | Sputcn32_1480 | -123 | 5.4 | AATTGAAAACTATTATCGTTA |
| Shewanella sp W3-18-1 | Sputw3181_2621 | -123 | 5.4 | AATTGAAAACTATTATCGTTA |
| Shewanella sp ANA-3 | Shewana3_2671 | -121 | 5.4 | AATTGAAAACTATTATCGTTA |
| Shewanella sp MR-4 | Shewmr4_2505 | -121 | 5.4 | AATTGAAAACTATTATCGTTA |
| Shewanella sp MR-7 | Shewmr7_2573 | -121 | 5.4 | AATTGAAAACTATTATCGTTA |
| Shewanella baltica OS155 | Sbal_1594 | -121 | 5.4 | AATTGAAAACTATTATCGTTA |
| Shewanella denitrificans OS217 | Sden_2415 | -116 | 5.4 | AATTGAAAACTATTATCGTTA |
| Shewanella frigidimarina NCIMB 400 | Sfri_2617 | -111 | 5.1 | AACTGAAAACTATTCTCGTTA |
| Shewanella amazonensis SB2B | Sama_1214 | -119 | 5.6 | AATTGAAAATTATTATCGTTA |
| Shewanella loihica PV-4 | Shew_2518 | -192 | 5.8 | CAATGAAAATGGTTCTCATTT |
| -123 | 5.7 | AATTGAAAATTATTATCGTTT | ||
| Shewanella pealeana ATCC 700345 | Spea_2691 | -191 | 5.1 | AAATAGTAACCATTCTTAATT |
| -126 | 5.7 | AATTGAAAATTATTATCGTTT | ||
| Shewanella halifaxensis HAW-EB4 | Shal_2777 | -126 | 5.7 | AATTGAAAATTATTATCGTTT |
| Shewanella piezotolerans WP3 | swp_3271 | -225 | 5.3 | AAATAATAACCATTACTATTT |
| -125 | 5.7 | AATTGAAAATTATTATCGTTT | ||
| Shewanella sediminis HAW-EB3 | Ssed_1531 | -219 | 4.9 | GAGCGATAATCATTCTCATCT |
| -126 | 5.6 | AATTGAAAACTATTCTCGTTT | ||
| Shewanella woodyi ATCC 51908 | Swoo_3123 | -218 | 4.8 | TAGTGATAATCGTTCTCACAA |
| -125 | 5.6 | AATTGAAAACTATTATCGTTT | ||
|
Position: -341
Score: 5.4 Sequence: TAACGATAATAGTTTTCAATT
Locus tag: Sbal223_2761
|
||||
| Sbal223_2761 | -341 | 5.4 | TAACGATAATAGTTTTCAATT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: mtrD | ||||
| Ortholog function: Periplasmic decaheme cytochrome c, MtrD | ||||
| Shewanella oneidensis MR-1 | SO1782 | -370 | 5.4 | TAACGATAATAGTTTTCAATT |
| Shewanella sp ANA-3 | Shewana3_2672 | -326 | 5.4 | TAACGATAATAGTTTTCAATT |
| Shewanella sp MR-4 | Shewmr4_2506 | -326 | 5.4 | TAACGATAATAGTTTTCAATT |
| Shewanella sp MR-7 | Shewmr7_2574 | -326 | 5.4 | TAACGATAATAGTTTTCAATT |
| Shewanella baltica OS155 | Sbal_1593 | -335 | 5.4 | TAACGATAATAGTTTTCAATT |
| Shewanella amazonensis SB2B | Sama_1213 | -297 | 5.6 | TAACGATAATAATTTTCAATT |
| -150 | 4.7 | AAATCAGACTAATTATTAATA | ||
| Shewanella loihica PV-4 | Shew_2519 | -291 | 5.7 | AAACGATAATAATTTTCAATT |
| -222 | 5.8 | AAATGAGAACCATTTTCATTG | ||
| Shewanella pealeana ATCC 700345 | Spea_2692 | -317 | 5.7 | AAACGATAATAATTTTCAATT |
| -252 | 5.1 | AATTAAGAATGGTTACTATTT | ||
| Shewanella halifaxensis HAW-EB4 | Shal_2778 | -336 | 5.7 | AAACGATAATAATTTTCAATT |
| Shewanella piezotolerans WP3 | swp_3272 | -339 | 5.7 | AAACGATAATAATTTTCAATT |
| -239 | 5.3 | AAATAGTAATGGTTATTATTT | ||
| Shewanella sediminis HAW-EB3 | Ssed_1530 | -322 | 5.6 | AAACGAGAATAGTTTTCAATT |
| -229 | 4.9 | AGATGAGAATGATTATCGCTC | ||
| -110 | 4.8 | AGATAAAAATGTTACTCATTT | ||
|
Position: -30
Score: 4.8 Sequence: GATTGCAAATGATTTTCAATG
Locus tag: Sbal223_2789
|
||||
| Sbal223_2789 | -30 | 4.8 | GATTGCAAATGATTTTCAATG | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: SO1755 | ||||
| Ortholog function: Phosphomannomutase (EC 5.4.2.8) clustering with Aga operon | ||||
| Shewanella oneidensis MR-1 | SO1755 | -30 | 5.3 | AATTGAAAATGATTTTCACTG |
| Shewanella putrefaciens CN-32 | Sputcn32_1454 | -30 | 4.8 | GATTGCAAATGATTTTCAATG |
| Shewanella sp W3-18-1 | Sputw3181_2648 | -30 | 4.8 | GATTGCAAATGATTTTCAATG |
| Shewanella sp ANA-3 | Shewana3_2707 | -30 | 4.9 | GATTGAAAATGATTTTCACTG |
| Shewanella sp MR-4 | Shewmr4_2541 | -30 | 4.9 | GATTGAAAATGATTTTCACTG |
| Shewanella sp MR-7 | Shewmr7_2608 | -31 | 4.9 | GATTGAAAATGATTTTCACTG |
| Shewanella baltica OS155 | Sbal_1561 | -30 | 4.8 | GATTGCAAATGATTTTCAATG |
| Shewanella frigidimarina NCIMB 400 | Sfri_2159 | -30 | 5.4 | TATTGAAAATGATTATCAATG |
| Shewanella sediminis HAW-EB3 | Ssed_1517 | -67 | 5.3 | AAATGAAAATCATTTGTAGTT |
| Shewanella woodyi ATCC 51908 | Swoo_3151 | -66 | 5.2 | CAATGCTAATGATTTTCAACT |
|
Position: -84
Score: 5.4 Sequence: AAGTGAGAACTATTCTTATCT
Locus tag: Sbal223_2957
|
||||
| Sbal223_2957 | -84 | 5.4 | AAGTGAGAACTATTCTTATCT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: SO1580 | ||||
| Ortholog function: TonB-dependent heme receptor | ||||
| Shewanella oneidensis MR-1 | SO1580 | -82 | 5.5 | ATGTGAGAATTATTCTCATCT |
| Shewanella putrefaciens CN-32 | Sputcn32_1308 | -84 | 5.6 | AATTGAGAACTATTCTTATCT |
| Shewanella sp W3-18-1 | Sputw3181_2795 | -84 | 5.6 | AATTGAGAACTATTCTTATCT |
| Shewanella sp ANA-3 | Shewana3_2862 | -81 | 5.6 | AGGTGAGAATTATTCTCATCT |
| Shewanella baltica OS155 | Sbal_1397 | -84 | 5.4 | AAGTGAGAACTATTCTTATCT |
| Shewanella denitrificans OS217 | Sden_2503 | -172 | 5.5 | AACTGATAATCATTCTCATTG |
| Shewanella piezotolerans WP3 | swp_0953 | -76 | 5.7 | AAGTGATAATCATTATCATTC |
|
Position: -49
Score: 5 Sequence: AAATGCAAATCATTACTATTC
Locus tag: Sbal223_3044
|
||||
| Sbal223_3044 | -49 | 5 | AAATGCAAATCATTACTATTC | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: SO1482 | ||||
| Ortholog function: TonB-dependent receptor | ||||
| Shewanella oneidensis MR-1 | SO1482 | -49 | 5 | GGATGGAAATCATTATCATTC |
| Shewanella putrefaciens CN-32 | Sputcn32_1237 | -49 | 4.7 | AAATACAAATCATTACTATTC |
| Shewanella sp W3-18-1 | Sputw3181_2867 | -49 | 4.7 | AAATACAAATCATTACTATTC |
| Shewanella sp ANA-3 | Shewana3_2944 | -48 | 5.8 | AGATGAAAATCATTATCATTC |
| Shewanella sp MR-4 | Shewmr4_2768 | -48 | 5.8 | AGATGAAAATCATTATCATTC |
| Shewanella sp MR-7 | Shewmr7_2846 | -48 | 5.8 | AGATGAAAATCATTATCATTC |
| Shewanella baltica OS155 | Sbal_1315 | -49 | 5 | AAATGCAAATCATTACTATTC |
| Shewanella denitrificans OS217 | Sden_1445 | -48 | 5.2 | CTATGATAATCATTATCATTC |
| Shewanella frigidimarina NCIMB 400 | Sfri_2440 | -52 | 5.6 | TTATGATAATCATTATCATTC |
| Shewanella loihica PV-4 | Shew_2690 | -51 | 6 | TATTGATAATCGTTATCATTT |
| Shewanella pealeana ATCC 700345 | Spea_2930 | -51 | 6 | TAATGATAATCGTTATCATCT |
| Shewanella halifaxensis HAW-EB4 | Shal_3021 | -51 | 5.6 | TAATAAGAATCGTTATCATCT |
| Shewanella piezotolerans WP3 | swp_3568 | -51 | 5.8 | TAATGATAATGGTTATCATCA |
| Shewanella sediminis HAW-EB3 | Ssed_3242 | -49 | 5.5 | AAATGCAAATCGTTATCATTC |
| Shewanella woodyi ATCC 51908 | Swoo_3375 | -51 | 6 | TAATGATAATCGTTATCATCT |
|
Position: -195
Score: 5.5 Sequence: AAATGATATCGTTTATCATTT
Locus tag: Sbal223_3076
|
||||
| Sbal223_3076 | -195 | 5.5 | AAATGATATCGTTTATCATTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: SO3406 | ||||
| Ortholog function: Conserved hypothetical protein | ||||
| Shewanella oneidensis MR-1 | SO3406 | -273 | 5.7 | AAATGATATTGTTTATCATTT |
| Shewanella sp MR-4 | Shewmr4_1148 | -177 | 5.7 | AAATGATATTGTTTATCATTT |
| Shewanella sp MR-7 | Shewmr7_1219 | -177 | 5.7 | AAATGATATTGTTTATCATTT |
| Shewanella baltica OS155 | Sbal_1237 | -195 | 5.5 | AAATGATATCGTTTATCATTT |
| Shewanella woodyi ATCC 51908 | Swoo_3307 | -96 | 5.7 | AAATAAAAACCGTTCTCATTA |
|
Position: -284
Score: 5.8 Sequence: AAATGATAATGATTTGTATTT
Locus tag: Sbal223_3338
|
||||
| Sbal223_3338 | -284 | 5.8 | AAATGATAATGATTTGTATTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: hmuA | ||||
| Ortholog function: TonB-dependent haem/haemoglobin receptor, HmuA | ||||
| Shewanella oneidensis MR-1 | SO3669 | -169 | 5.7 | AAATGATAATGATTTCTATTT |
| Shewanella putrefaciens CN-32 | Sputcn32_0966 | -178 | 6.1 | AAATGATAATGATTACCATTT |
| Shewanella sp W3-18-1 | Sputw3181_3201 | -178 | 6.1 | AAATGATAATGATTACCATTT |
| Shewanella sp ANA-3 | Shewana3_3235 | -171 | 6 | AAATGATAATGATTTCCATTT |
| Shewanella baltica OS155 | Sbal_0952 | -284 | 6.1 | AAATGATAATGATTTGCATTT |
| Shewanella denitrificans OS217 | Sden_0790 | -133 | 6.5 | AAATGATAATGATTTTCATTT |
| Shewanella pealeana ATCC 700345 | Spea_3327 | -143 | 6.5 | AAATGATAATGATTTTCATTT |
| Shewanella halifaxensis HAW-EB4 | Shal_3399 | -144 | 6.5 | AAATGATAATGATTTTCATTT |
| Shewanella piezotolerans WP3 | swp_3978 | -143 | 6.5 | AAATGATAATGATTTTCATTT |
| Shewanella woodyi ATCC 51908 | Swoo_4004 | -113 | 6.5 | AAATGATAATGATTTTCATTT |
|
Position: -99
Score: 5.8 Sequence: AAATACAAATCATTATCATTT
Locus tag: Sbal223_3339
|
||||
| Sbal223_3339 | -99 | 5.8 | AAATACAAATCATTATCATTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: tonB | ||||
| Ortholog function: TonB mediated energy transduction system, energy transducer component, TonB | ||||
| Shewanella oneidensis MR-1 | SO3670 | -97 | 5.7 | AAATAGAAATCATTATCATTT |
| Shewanella putrefaciens CN-32 | Sputcn32_0965 | -75 | 6.1 | AAATGGTAATCATTATCATTT |
| Shewanella sp W3-18-1 | Sputw3181_3202 | -75 | 6.1 | AAATGGTAATCATTATCATTT |
| Shewanella sp ANA-3 | Shewana3_3236 | -98 | 6 | AAATGGAAATCATTATCATTT |
| Shewanella baltica OS155 | Sbal_0951 | -63 | 6.1 | AAATGCAAATCATTATCATTT |
| Shewanella denitrificans OS217 | Sden_0789 | -66 | 6.5 | AAATGAAAATCATTATCATTT |
| Shewanella pealeana ATCC 700345 | Spea_3328 | -206 | 6.5 | AAATGAAAATCATTATCATTT |
| Shewanella halifaxensis HAW-EB4 | Shal_3400 | -207 | 6.5 | AAATGAAAATCATTATCATTT |
| Shewanella piezotolerans WP3 | swp_3979 | -183 | 6.5 | AAATGAAAATCATTATCATTT |
| Shewanella woodyi ATCC 51908 | Swoo_4005 | -80 | 6.5 | AAATGAAAATCATTATCATTT |
|
Position: -126
Score: 5.6 Sequence: AAATGAGAATGGTTTTTATCA
Locus tag: Sbal223_3358
|
||||
| Sbal223_3358 | -126 | 5.6 | AAATGAGAATGGTTTTTATCA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: bfr2 | ||||
| Ortholog function: Bacterioferritin subunit 2 | ||||
| Shewanella oneidensis MR-1 | SO1111 | -125 | 5.2 | TAATGAGAATGCTTTTAATTA |
| Shewanella putrefaciens CN-32 | Sputcn32_0948 | -126 | 5.5 | AAATGAGAATGGTTTTTATAA |
| Shewanella sp W3-18-1 | Sputw3181_3228 | -126 | 5.5 | AAATGAGAATGGTTTTTATAA |
| Shewanella sp ANA-3 | Shewana3_0946 | -125 | 5.4 | TAATGAGAATGCTTTTTATCT |
| Shewanella sp MR-4 | Shewmr4_0944 | -124 | 5.4 | TAATGAGAATGCTTTTTATCT |
| Shewanella sp MR-7 | Shewmr7_0982 | -125 | 5.4 | TAATGAGAATGCTTTTTATCT |
| Shewanella baltica OS155 | Sbal_0932 | -126 | 5.3 | AAATGAGAATGGTTGTTATCA |
| Shewanella denitrificans OS217 | Sden_0990 | -120 | 5.6 | TAATGATAATGGTTATCACTA |
| Shewanella frigidimarina NCIMB 400 | Sfri_0957 | -121 | 6 | TAATGATAATAGTTATCAATT |
| Shewanella amazonensis SB2B | Sama_2530 | -122 | 4.7 | CAATAAGAATAATTAGCCTTT |
| Shewanella loihica PV-4 | Shew_2873 | -115 | 4.8 | GAATGAGAACGATTTTCTTTG |
| Shewanella pealeana ATCC 700345 | Spea_3095 | -116 | 5.4 | TAATGAGAATGGTTATCTTTA |
| Shewanella halifaxensis HAW-EB4 | Shal_3179 | -121 | 4.3 | TAGTGATAATGAAAATCACTA |
| -88 | 4.3 | TGTTGATATTTAACCTTATTT | ||
| Shewanella piezotolerans WP3 | swp_1175 | -118 | 5.5 | TAATGATAATAATTATCTTTA |
| Shewanella sediminis HAW-EB3 | Ssed_2230 | -137 | 4.6 | TAATGGGAATGATTATCTCTA |
| Shewanella woodyi ATCC 51908 | Swoo_3608 | -167 | 4.5 | AAATGATAATGCTTAATGTTA |
|
Position: -145
Score: 5 Sequence: TAATGATAACAATTTGTATTG
Locus tag: Sbal223_3383
|
||||
| Sbal223_3383 | -145 | 5 | TAATGATAACAATTTGTATTG | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: Sama_2657 | ||||
| Ortholog function: ApbE family protein, putative | ||||
| Shewanella sp ANA-3 | Shewana3_0921 | -84 | 4.9 | TAATGATAATGATTTGCGTTG |
| Shewanella sp MR-4 | Shewmr4_0922 | -84 | 4.9 | TAATGATAATGATTTGCGTTG |
| Shewanella sp MR-7 | Shewmr7_0957 | -84 | 4.9 | TAATGATAATGATTTGCGTTG |
| Shewanella baltica OS155 | Sbal_0906 | -83 | 4.8 | TAATGATAACGATTTGCGTTG |
| Shewanella amazonensis SB2B | Sama_2657 | -84 | 5.4 | TAATGCGAACTATTTTCATAT |
|
Position: -76
Score: 5.4 Sequence: AACTGATAAGCATTATCATTA
Locus tag: Sbal223_3635
|
||||
| Sbal223_3635 | -76 | 5.4 | AACTGATAAGCATTATCATTA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: fbpA | ||||
| Ortholog function: ABC iron(III) transporter, periplasmic ligand-binding subunit, FbpA | ||||
| Shewanella oneidensis MR-1 | SO0744 | -76 | 5.7 | AACTGATAACTATTATCATTA |
| Shewanella putrefaciens CN-32 | Sputcn32_3227 | -74 | 5.8 | AAGTGATAACTATTATCATTA |
| Shewanella sp W3-18-1 | Sputw3181_0714 | -74 | 5.8 | AAGTGATAACTATTATCATTA |
| Shewanella sp ANA-3 | Shewana3_3517 | -76 | 5.7 | AACTGATAACTATTATCATTA |
| Shewanella sp MR-4 | Shewmr4_3347 | -76 | 5.7 | AACTGATAACTATTATCATTA |
| Shewanella sp MR-7 | Shewmr7_0606 | -76 | 5.7 | AACTGATAACTATTATCATTA |
| Shewanella baltica OS155 | Sbal_0812 | -76 | 5.4 | AACTGATAAGCATTATCATTA |
| Shewanella frigidimarina NCIMB 400 | Sfri_0636 | -67 | 5.9 | AATTGATAACCATTATCAATT |
| Shewanella amazonensis SB2B | Sama_0666 | -57 | 5.8 | TAGTGATAATAATTATCATTA |
| Shewanella loihica PV-4 | Shew_0861 | -41 | 6.1 | AATTGATAATTATTATCATTA |
| Shewanella pealeana ATCC 700345 | Spea_0844 | -60 | 5.8 | AATTGAGAATTATTATCAGTT |
| Shewanella halifaxensis HAW-EB4 | Shal_0897 | -64 | 5.4 | AATTGAGAATTATTATCAGTC |
| Shewanella piezotolerans WP3 | swp_4107 | -60 | 5.2 | AATTGAGAACTATTATCAGCA |
| Shewanella sediminis HAW-EB3 | Ssed_0945 | -58 | 5.7 | GATTGATAATAATTATCATTA |
| Shewanella woodyi ATCC 51908 | Swoo_0996 | -57 | 5.4 | AATTGATAACTATTATCATCG |
|
Position: -53
Score: 5.3 Sequence: ATTTGATAAGCGTTTTCATTT
Locus tag: Sbal223_3726
|
||||
| Sbal223_3726 | -53 | 5.3 | ATTTGATAAGCGTTTTCATTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: bfd | ||||
| Ortholog function: Bacterioferritin-associated ferredoxin | ||||
| Shewanella oneidensis MR-1 | SO0583 | -55 | 5.3 | ATTTGATAAGCGTTTTCATTT |
| Shewanella putrefaciens CN-32 | Sputcn32_3295 | -54 | 5.3 | ATTTGATAAGCGTTTTCATTT |
| Shewanella sp W3-18-1 | Sputw3181_0646 | -54 | 5.3 | ATTTGATAAGCGTTTTCATTT |
| Shewanella sp ANA-3 | Shewana3_0581 | -54 | 5.3 | ATTTGATAAGCGTTTTCATTT |
| Shewanella sp MR-4 | Shewmr4_0582 | -54 | 5.3 | ATTTGATAAGCGTTTTCATTT |
| Shewanella sp MR-7 | Shewmr7_3448 | -54 | 5.3 | ATTTGATAAGCGTTTTCATTT |
| Shewanella baltica OS155 | Sbal_0542 | -53 | 5.3 | ATTTGATAAGCGTTTTCATTT |
| Shewanella denitrificans OS217 | Sden_3217 | -99 | 5.7 | CAATGATAACCGTTTTCATTT |
| Shewanella frigidimarina NCIMB 400 | Sfri_3324 | -76 | 5.7 | CAATGATAACCGTTTTCATTT |
| Shewanella amazonensis SB2B | Sama_3040 | -59 | 5.5 | TGATGAGAACGGTTTTTATTT |
| Shewanella pealeana ATCC 700345 | Spea_3555 | -58 | 5.8 | CATTGAGAATCATTTTCATTT |
| Shewanella halifaxensis HAW-EB4 | Shal_3649 | -58 | 5.5 | CACTGAGAATCATTTTCATTT |
| Shewanella piezotolerans WP3 | swp_0771 | -86 | 5.3 | GATTGATAACTATTCTCATCA |
| -57 | 5.6 | CATTGAGAATCGTTTTCATTT | ||
|
Position: -86
Score: 4.5 Sequence: AAATCGAATCAATTCGCATTA
Locus tag: Sbal223_4218
|
||||
| Sbal223_4218 | -86 | 4.5 | AAATCGAATCAATTCGCATTA | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: SO4700 | ||||
| Ortholog function: Hypothetical outer membrane protein | ||||
| Shewanella oneidensis MR-1 | SO4700 | -86 | 5.3 | AAATCAAATCCATTCTCATTA |
| Shewanella sp ANA-3 | Shewana3_4052 | -86 | 4.8 | AAATCGAATCCATTCTCATTA |
| Shewanella sp MR-4 | Shewmr4_3843 | -27 | 5.3 | AAATCAAATCCATTCTCATTA |
| Shewanella sp MR-7 | Shewmr7_3936 | -27 | 5.3 | AAATCAAATCCATTCTCATTA |
| Shewanella baltica OS155 | Sbal_0123 | -86 | 4.5 | AAATCGAATCAATTCGCATTA |
| Shewanella denitrificans OS217 | Sden_3594 | -123 | 4.7 | AAATAAGACTGGTTTGTATTT |
| Shewanella frigidimarina NCIMB 400 | Sfri_3875 | -80 | 5.3 | AAACGAGACTGATTATCATTT |
| Shewanella loihica PV-4 | Shew_3658 | -83 | 5.3 | AAATGCAACCAATTCTCATTT |
| Shewanella pealeana ATCC 700345 | Spea_4066 | 7 | 5 | AAATACGAGCTATTATCATTT |
| Shewanella halifaxensis HAW-EB4 | Shal_0192 | -87 | 4.4 | AAATACGTCCCATTATCATTT |
| Shewanella piezotolerans WP3 | swp_4927 | -86 | 5 | AAATACAACCGATTATCATTT |
| Shewanella sediminis HAW-EB3 | Ssed_0144 | -97 | 5.5 | AAATGGGAAGTGTTATCATTT |
| Shewanella woodyi ATCC 51908 | Swoo_0123 | -85 | 5.2 | AAATACAAAGCGTTATCATTT |
|
Position: -59
Score: 6 Sequence: TAATGAGAATTGTTATCATCT
Locus tag: Sbal223_4304
|
||||
| Sbal223_4304 | -59 | 6 | TAATGAGAATTGTTATCATCT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: SO4740 | ||||
| Ortholog function: Conserved hypothetical inner membrane protein | ||||
| Shewanella oneidensis MR-1 | SO4740 | -60 | 6 | TAATGAGAATTGTTATCATCT |
| Shewanella putrefaciens CN-32 | Sputcn32_3921 | -59 | 6 | TAATGAGAATTGTTATCATCT |
| Shewanella sp W3-18-1 | Sputw3181_4047 | -59 | 6 | TAATGAGAATTGTTATCATCT |
| Shewanella sp ANA-3 | Shewana3_4124 | -60 | 6 | TAATGAGAATTGTTATCATCT |
| Shewanella sp MR-4 | Shewmr4_3919 | -60 | 6 | TAATGAGAATTGTTATCATCT |
| Shewanella sp MR-7 | Shewmr7_4011 | -60 | 6 | TAATGAGAATTGTTATCATCT |
| Shewanella baltica OS155 | Sbal_4341 | -59 | 6 | TAATGAGAATTGTTATCATCT |
| Shewanella denitrificans OS217 | Sden_3706 | -50 | 6 | TATTGATAACGATTATCATTT |
| Shewanella frigidimarina NCIMB 400 | Sfri_4031 | -46 | 6 | TAATGAGAACTGTTATCATTT |
| Shewanella amazonensis SB2B | Sama_3636 | -50 | 5.9 | AAGTGATAACTATTATCATTT |
| Shewanella loihica PV-4 | Shew_3815 | -46 | 6.5 | AAATGATAATAATTATCATTT |
| Shewanella pealeana ATCC 700345 | Spea_4226 | -47 | 5.9 | AAATGAGAAGCGTTATCATTT |
| Shewanella halifaxensis HAW-EB4 | Shal_4274 | -47 | 6.3 | AAATGATAACCATTATCATTT |
| Shewanella piezotolerans WP3 | swp_5137 | -46 | 6.1 | AAATGATAATCGTTATCATCT |
| Shewanella sediminis HAW-EB3 | Ssed_4479 | -47 | 6.1 | AGATGAGAATAGTTATCATTT |
| Shewanella woodyi ATCC 51908 | Swoo_4887 | -50 | 6.3 | AAATGAGAACCATTATCATTT |
|
Position: -68
Score: 5.6 Sequence: AAATAAAAACACTTCTCATTT
Locus tag: Sbal223_4307
|
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| Sbal223_4307 | -68 | 5.6 | AAATAAAAACACTTCTCATTT | |
| Supported by regulated orthologs from reference regulons | ||||
| Ortholog gene name: SO4743 | ||||
| Ortholog function: TonB-dependent siderophore receptor | ||||
| Shewanella oneidensis MR-1 | SO4743 | -116 | 5.7 | AAATAAAAACAATTCTTATTT |
| Shewanella putrefaciens CN-32 | Sputcn32_3953 | -68 | 5.6 | AAATAAAAACACTTCTCATTT |
| Shewanella sp W3-18-1 | Sputw3181_4050 | -68 | 5.6 | AAATAAAAACACTTCTCATTT |
| Shewanella sp ANA-3 | Shewana3_4127 | -68 | 5.7 | AAATAAAAACAATTCTTATTT |
| Shewanella sp MR-4 | Shewmr4_3922 | -68 | 5.7 | AAATAAAAACAATTCTTATTT |
| Shewanella sp MR-7 | Shewmr7_4014 | -68 | 5.7 | AAATAAAAACAATTCTTATTT |
| Shewanella baltica OS155 | Sbal_4363 | -68 | 5.6 | AAATAAAAACACTTCTCATTT |
| Shewanella frigidimarina NCIMB 400 | Sfri_4042 | -68 | 5.4 | AAATGGAAACGCTTCTCATTT |
| Shewanella amazonensis SB2B | Sama_3641 | -73 | 5.9 | AAATGCTAATCATTATCAATT |
| Shewanella loihica PV-4 | Shew_3841 | -69 | 6 | AAATAAAAACAATTCTCATTT |
| Shewanella pealeana ATCC 700345 | Spea_4236 | -69 | 6 | AAATAAAAATAGTTCTCATTT |
| Shewanella halifaxensis HAW-EB4 | Shal_4287 | -68 | 6 | AAATAAAAATAGTTCTCATTT |
| Shewanella piezotolerans WP3 | swp_5150 | -68 | 5.6 | GAATAAAAACAATTCTCATTT |
| Shewanella sediminis HAW-EB3 | Ssed_4483 | -66 | 6 | AAATAAAAACGATTCTCATTT |
| Shewanella woodyi ATCC 51908 | Swoo_4894 | -67 | 6.2 | AAATAAAAATAATTCTCATTT |