Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing Sfri_2008 gene

Properties
Regulog: Fur - Shewanellaceae
Regulator type: Transcription factor
Regulator family: FUR
Regulation mode: repressor (activator)
Biological process: Iron homeostasis
Effector: Iron ion, (Fe2+)
Phylum: Proteobacteria
Built upon 505 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Shewanella amazonensis SB2B
Position: -52
Score: 5.97095
Sequence: ATATGATAACTATTCTCATTT
Locus tag: Sama_1788
Name: Sfri_2008
Funciton: Hypothetical protein
Sfri_2008 -52 6 ATATGATAACTATTCTCATTT Sama_1788
Shewanella baltica OS155
Position: -165
Score: 4.72252
Sequence: AAATAAAAATAATGATCACAT
Position: -63
Score: 5.5943
Sequence: TGTTGATAACAGTTATCATTT
Locus tag: Sbal_2198
Name: Sfri_2008
Funciton: Hypothetical protein
Sfri_2008 -165 4.7 AAATAAAAATAATGATCACAT Sbal_2198
-63 5.6 TGTTGATAACAGTTATCATTT
Shewanella denitrificans OS217
Position: -36
Score: 6.00614
Sequence: AAATAAAAACCATTCTCATTT
Locus tag: Sden_1854
Name: Sfri_2008
Funciton: Hypothetical protein
Sfri_2008 -36 6 AAATAAAAACCATTCTCATTT Sden_1854
Shewanella frigidimarina NCIMB 400
Position: -116
Score: 5.97818
Sequence: AATTGATAACTATTCTCATTA
Locus tag: Sfri_2008
Name: Sfri_2008
Funciton: Hypothetical protein
Sfri_2008 -116 6 AATTGATAACTATTCTCATTA Sfri_2008
Shewanella halifaxensis HAW-EB4
Position: -62
Score: 5.8807
Sequence: TGTTGATAATCATTCTCATTT
Locus tag: Shal_2195
Name: Sfri_2008
Funciton: Hypothetical protein
Sfri_2008 -62 5.9 TGTTGATAATCATTCTCATTT Shal_2195
Shewanella pealeana ATCC 700345
Position: -117
Score: 6.13016
Sequence: TATTGATAATCATTATCATTT
Locus tag: Spea_2212
Name: Sfri_2008
Funciton: Hypothetical protein
Sfri_2008 -117 6.1 TATTGATAATCATTATCATTT Spea_2212
Shewanella putrefaciens CN-32
Position: -63
Score: 5.90495
Sequence: TGTTGATAATAATTATCATTT
Locus tag: Sputcn32_1997
Name: Sfri_2008
Funciton: Hypothetical protein
Sfri_2008 -63 5.9 TGTTGATAATAATTATCATTT Sputcn32_1997
Shewanella sediminis HAW-EB3
Position: -64
Score: 5.79792
Sequence: CATTGATAATCATTCTCATTT
Locus tag: Ssed_2208
Name: Sfri_2008
Funciton: Hypothetical protein
Sfri_2008 -64 5.8 CATTGATAATCATTCTCATTT Ssed_2208
Shewanella sp MR-4
Position: -59
Score: 5.73917
Sequence: TGTTGATAACTATTCTCATTT
Locus tag: Shewmr4_2003
Name: Sfri_2008
Funciton: Hypothetical protein
Sfri_2008 -59 5.7 TGTTGATAACTATTCTCATTT Shewmr4_2003
Shewanella sp MR-7
Position: -59
Score: 5.73917
Sequence: TGTTGATAACTATTCTCATTT
Locus tag: Shewmr7_1972
Name: Sfri_2008
Funciton: Hypothetical protein
Sfri_2008 -59 5.7 TGTTGATAACTATTCTCATTT Shewmr7_1972
Shewanella woodyi ATCC 51908
Position: -62
Score: 5.8807
Sequence: AGTTGATAACCATTCTCATTT
Locus tag: Swoo_2428
Name: Sfri_2008
Funciton: Hypothetical protein
Sfri_2008 -62 5.9 AGTTGATAACCATTCTCATTT Swoo_2428
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