Propagation of Fnr regulog to Dickeya dadantii 3937

Reference regulog properties
Source regulog:	Fnr - Enterobacteriales
Regulator type:	Transcription factor
Regulator family:	CRP
Regulation mode:	activator (repressor)
Biological process:	Energy metabolism; Anaerobic metabolism
Effector:	Oxygen
Phylum:	Gammaproteobacteria
Propagated regulon:
Target genome	Dickeya dadantii 3937
Orthologous TF(s)	null
Regulated genes	56

Built upon 685 sites [see more]

Predicted regulatory interactions in *Dickeya dadantii 3937*
	Locus tag	Position	Score	Sequence
Position: -139 Score: 4.4 Sequence: TTGATTTTTATTAA Locus tag: null
	null	-139	4.4	TTGATTTTTATTAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: pitA
Ortholog function: Phosphate transporter, low-affinity
Erwinia carotovora subsp. atroseptica SCRI1043	ECA0048	-140	4	TTGATTTATATTGA
Escherichia coli str. K-12 substr. MG1655	b3493	-116	3.8	TTGAGTGAAATCCA
Salmonella typhimurium LT2	STM3589	-116	4.2	GTGATATCAAACAA
Yersinia pestis KIM	y3862	-201	4.1	TTGAATAAAATCAT

Position: -6 Score: 3.6 Sequence: TTGACCATGATAAA Locus tag: null
	null	-6	3.6	TTGACCATGATAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: dcuR
Ortholog function: Fumarate respiration transcriptional regulator DcuR
Serratia proteamaculans 568	Spro_1958	-188	3.3	TTAATGGCTATCAT

Position: -123 Score: 4 Sequence: CTGACCTGAATCAA Position: -49 Score: 3.6 Sequence: TTGAGATAGAAGAA Locus tag: null
	null	-123	4	CTGACCTGAATCAA
		-49	3.6	TTGAGATAGAAGAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: pfkA
Ortholog function: 6-phosphofructokinase (EC 2.7.1.11)
Citrobacter koseri ATCC BAA-895	CKO_03085	-132	4	CTGACCTGAATCAA
Edwardsiella tarda EIB202	ETAE_3450	-223	4	CTGACCTGAATCAA
Enterobacter sp. 638	Ent638_4056	-174	4	CTGACCTGAATCAA
Erwinia amylovora ATCC 49946	EAM_0103	-31	4	ATTATTTGCATCAA
Erwinia carotovora subsp. atroseptica SCRI1043	ECA4307	-140	4	CTGACCTGAATCAA
Escherichia coli str. K-12 substr. MG1655	b3916	-125	4	CTGACCTGAATCAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578	KPN_04223	-123	4	CTGACCTGAATCAA
Photorhabdus luminescens subsp. laumondii TTO1	plu4774	-203	4.1	TTGATCTCAAAAAA
Proteus mirabilis HI4320	PMI3203	-194	3.7	TTAATGCGCATCAA
Salmonella typhimurium LT2	STM4062	-126	4	CTGACCTGAATCAA
Serratia proteamaculans 568	Spro_4807	-145	4.1	GTGACTTGAATCAA
Yersinia pestis KIM	y0059	-148	4.2	CTGACTTGAATCAA

Position: -227 Score: 3.9 Sequence: TTGAGTGATATCAC Locus tag: null
	null	-227	3.9	TTGAGTGATATCAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: uxaC
Ortholog function: Uronate isomerase (EC 5.3.1.12)
Citrobacter koseri ATCC BAA-895	CKO_04494	-43	3.8	TTGATCCAACTCAC
Enterobacter sp. 638	Ent638_3546	-105	4.2	TTGATCTAACTCAC
Erwinia carotovora subsp. atroseptica SCRI1043	ECA0645	-225	3.9	TTGAGTGATATCAC
Escherichia coli str. K-12 substr. MG1655	b3092	-106	4.2	TTGATCTAACTCAC
Klebsiella pneumoniae subsp. pneumoniae MGH 78578	KPN_03520	-125	4.2	TTGATCTAACTCAC

Position: -188 Score: 4.5 Sequence: CTGATCCAAATCAA Locus tag: null
	null	-188	4.5	CTGATCCAAATCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: purM
Ortholog function: Phosphoribosylformylglycinamidine cyclo-ligase (EC 6.3.3.1)
Edwardsiella tarda EIB202	ETAE_1086	-186	4.7	ATGATCTCAATCAA
Erwinia carotovora subsp. atroseptica SCRI1043	ECA1254	-198	4.3	CTGATCCAGATCAA
Escherichia coli str. K-12 substr. MG1655	b2499	-243	4.6	TTGACTTTAGTCAA
Photorhabdus luminescens subsp. laumondii TTO1	plu2760	-137	5.2	TTGATTTTCATCAA
Proteus mirabilis HI4320	PMI1575	-148	5	TTGATATTGATCAA
Salmonella typhimurium LT2	STM2499.S	-309	4.4	TTGACCTGGATCAA
Yersinia pestis KIM	y1407	-312	4.5	CTGATTCAGATCAA
		-274	3.7	ATGCTAAAAATCAG

Position: -98 Score: 4.4 Sequence: TTGATTTGGATCAG Locus tag: null
	null	-98	4.4	TTGATTTGGATCAG
Supported by regulated orthologs from reference regulons
Ortholog gene name: upp
Ortholog function: Uracil phosphoribosyltransferase (EC 2.4.2.9)
Citrobacter koseri ATCC BAA-895	CKO_00293	-103	4.6	TTGATCCATGTCAA
Edwardsiella tarda EIB202	ETAE_1087	-97	4.5	TTGATTGAGATCAT
Enterobacter sp. 638	Ent638_2986	-97	4.4	TTGATCACCGTCAA
Erwinia carotovora subsp. atroseptica SCRI1043	ECA1255	-169	4.3	TTGATCTGGATCAG
Escherichia coli str. K-12 substr. MG1655	b2498	-95	4.6	TTGACTAAAGTCAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578	KPN_02821	-96	5	TTGATATACGTCAA
Photorhabdus luminescens subsp. laumondii TTO1	plu2759	-103	5.1	TTGATGAAAATCAA
Proteus mirabilis HI4320	PMI1574	-97	5.1	TTGATCAATATCAA
Salmonella typhimurium LT2	STM2498	-103	4.6	TTGATCCAGGTCAA
Yersinia pestis KIM	y1408	-98	4.4	TTGATCTGAATCAG

Position: -301 Score: 3.5 Sequence: TTAAGATTTGTCAA Position: -252 Score: 3.8 Sequence: GTGATCTTAATCAC Locus tag: null
	null	-301	3.5	TTAAGATTTGTCAA
		-252	3.8	GTGATCTTAATCAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: sdhC
Ortholog function: Succinate dehydrogenase cytochrome b-556 subunit
Citrobacter koseri ATCC BAA-895	CKO_02438	25	3.6	ATGTGAAAAAACAA
Edwardsiella tarda EIB202	ETAE_2588	10	4
Escherichia coli str. K-12 substr. MG1655	b0721	10	3.6	ATGTGAAAAAACAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578	KPN_00728	-104	3.6	ATGTGAAAAAACAA
Photorhabdus luminescens subsp. laumondii TTO1	plu1426	-127	4	TTGTGAAAAAACAA
Proteus mirabilis HI4320	PMI0565	-2	4	TTGTGAAAAAACAA
Salmonella typhimurium LT2	STM0732	10	3.6	ATGTGAAAAAACAA
Serratia proteamaculans 568	Spro_1263	-249	4.1	GTGATCTAAATCAC
Yersinia pestis KIM	y3071	-224	3.8	ATGTTATCAATCAG

Position: -178 Score: 3.4 Sequence: CTGACGTACAACAG Locus tag: null
	null	-178	3.4	CTGACGTACAACAG
Supported by regulated orthologs from reference regulons
Ortholog gene name: gnd
Ortholog function: 6-phosphogluconate dehydrogenase, decarboxylating (EC 1.1.1.44)
Citrobacter koseri ATCC BAA-895	CKO_00756	-337	4	TTGATTACTATCTA
Enterobacter sp. 638	Ent638_2642	-112	3.7	GTGACATAGATCAG
Erwinia amylovora ATCC 49946	EAM_2150	-264	3.8	TTCTCTTAAGTCAA
		-169	4	TTTTTTTTAAACAA
Erwinia carotovora subsp. atroseptica SCRI1043	ECA1444	-228	3.3	TTGAGTGGTAACAT
Escherichia coli str. K-12 substr. MG1655	b2029	-375	3.4	ATGGCTTCGATCAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578	KPN_02499	-322	3.7	TTTTTATAGTTCAA
Proteus mirabilis HI4320	PMI0655	-7	3.7	TTATTTCATGTCAA
Serratia proteamaculans 568	Spro_1608	-384	3.3	ATTATTTGAATTAA

Position: -106 Score: 4.5 Sequence: TAGATTTAGATCAA Locus tag: null
	null	-106	4.5	TAGATTTAGATCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: dcuB
Ortholog function: C4-dicarboxylate transporter DcuB
Edwardsiella tarda EIB202	ETAE_2844	-271	3.4	TTATTTTTTATTAA
Enterobacter sp. 638	Ent638_2479	-93	3.6	TTGAATTTATACAA
Erwinia carotovora subsp. atroseptica SCRI1043	ECA1533	-279	3.7	TTTATTTTCATGAA
		-243	4.5	TAGATTTAGATCAA
Escherichia coli str. K-12 substr. MG1655	b4123	-283	4	CCGATAAATATCAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578	KPN_04367	-210	3.4	TCTACTCATATCAA
Proteus mirabilis HI4320	PMI0389	-78	3.4	TTGTTTTTTTGCAA
Salmonella typhimurium LT2	STM4301	-72	3.5	TTCACAAAAATCAG
Serratia proteamaculans 568	Spro_3863	-189	3.8	CAGATTAAAATCAA
Yersinia pestis KIM	y0901	-239	3.4	TTAATTTAAAGCAC

Position: 0 Score: 3.7 Sequence: ATGAAAATTATCAA Locus tag: null
	null	0	3.7	ATGAAAATTATCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: citD
Ortholog function: Citrate lyase gamma chain, acyl carrier protein (EC 4.1.3.6)
Citrobacter koseri ATCC BAA-895	CKO_02542	-184	4.1	GTGAAATAAATCAA
Enterobacter sp. 638	Ent638_3374	19	4.1	TTTATAAAGGTCAA
Erwinia carotovora subsp. atroseptica SCRI1043	ECA2573	-93	3.8	TTGAGCCAAATAAA
Escherichia coli str. K-12 substr. MG1655	b0617	-179	4.1	GTGAAATAAATCAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578	KPN_00035	-125	3.6	TTAATTAACAACAT
Salmonella typhimurium LT2	STM0059	-227	4.2	TTGATGGGTAACAA
Salmonella typhimurium LT2	STM0623	-182	4.1	GTGAAATAAATCAA

Position: -82 Score: 4.6 Sequence: TTGATTTTGCTCAA Locus tag: null
	null	-82	4.6	TTGATTTTGCTCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: fdnG
Ortholog function: Formate dehydrogenase N alpha subunit (EC 1.2.1.2) @ selenocysteine-containing
Erwinia carotovora subsp. atroseptica SCRI1043	ECA1408	-81	3.9	TTGATTTTGCGCAA

Position: -115 Score: 4.4 Sequence: TTGCGCTAAATCAA Position: -49 Score: 4 Sequence: ATGCTTTTAAACAA Locus tag: null
	null	-115	4.4	TTGCGCTAAATCAA
		-49	4	ATGCTTTTAAACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: hcp
Ortholog function: Hydroxylamine reductase (EC 1.7.-.-)
Edwardsiella tarda EIB202	ETAE_2215	-113	4.4	TTGCGTTATATCAA
Erwinia carotovora subsp. atroseptica SCRI1043	ECA2662	-114	4.4	TTGCGCTAAATCAA
Proteus mirabilis HI4320	PMI2112	-131	4.4	TTGCGTTAGATCAA
Serratia proteamaculans 568	Spro_1666	-66	4.4	TTGCGCTAAATCAA
Yersinia pestis KIM	y2819	-115	4.1	TTGCGTCAAATCAA

Position: -7 Score: 3.6 Sequence: GTGATTTATGCCAA Locus tag: null
	null	-7	3.6	GTGATTTATGCCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ynfI
Ortholog function: Putative oxidoreductase component of anaerobic dehydrogenases; Functional role page for Chaperone protein TorD
Citrobacter koseri ATCC BAA-895	CKO_01585	-32	4.3
Enterobacter sp. 638	Ent638_1925	-107	3.7	TTGATGGGGATTAA
Escherichia coli str. K-12 substr. MG1655	b1591	-113	4.1	TTGATATGGATTAA
Salmonella typhimurium LT2	STM1495	-116	3.7	TTGACATGGATTAA
Serratia proteamaculans 568	Spro_1690	-164	4.2	TTGATAGCAGACAA
		-40	4.2	ATGACGTTTATCAA

Position: -150 Score: 4.8 Sequence: TTCATATAAATCAA Position: -75 Score: 4.1 Sequence: ATGATCCACGTCAA Locus tag: null
	null	-150	4.8	TTCATATAAATCAA
		-75	4.1	ATGATCCACGTCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: focA
Ortholog function: Formate efflux transporter (TC 2.A.44 family)
Citrobacter koseri ATCC BAA-895	CKO_02167	-116	4.9	ATGATCTATATCAA
Edwardsiella tarda EIB202	ETAE_2181	-117	4.2	ATGATCCATGTCAA
Enterobacter sp. 638	Ent638_1424	-74	4.9	ATGATCTATATCAA
Erwinia carotovora subsp. atroseptica SCRI1043	ECA2596	-228	4	ATGATTTTTATTAA
		-75	4.5	ATGATCCACATCAA
Escherichia coli str. K-12 substr. MG1655	b0904	-74	4.9	ATGATCTATATCAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578	KPN_00932	-117	4.9	ATGATCTATATCAA
Photorhabdus luminescens subsp. laumondii TTO1	plu1614	-267	4.1	TTTATTTGCAACAA
		-159	4.7	TTTATTAAAATCAA
		-84	4.9	ATGATCTATATCAA
Proteus mirabilis HI4320	PMI0706	-159	4.1	TTATTATTAATCAA
		-85	4.5	ATGATCCATATCAA
Salmonella typhimurium LT2	STM0974	-74	4.9	ATGATCTATATCAA
Serratia proteamaculans 568	Spro_1703	-143	3.9	ATAATTTAACTCAA
		-81	4.6	ATGATCCAAATCAA
Yersinia pestis KIM	y2789	-80	4.5	ATGATCCATATCAA

Position: 0 Score: 3.7 Sequence: ATGAAAATTATCAA Locus tag: null
	null	0	3.7	ATGAAAATTATCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: citD
Ortholog function: Citrate lyase gamma chain, acyl carrier protein (EC 4.1.3.6)
Citrobacter koseri ATCC BAA-895	CKO_02542	-184	4.1	GTGAAATAAATCAA
Enterobacter sp. 638	Ent638_3374	19	4.1	TTTATAAAGGTCAA
Erwinia carotovora subsp. atroseptica SCRI1043	ECA2573	-93	3.8	TTGAGCCAAATAAA
Escherichia coli str. K-12 substr. MG1655	b0617	-179	4.1	GTGAAATAAATCAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578	KPN_00035	-125	3.6	TTAATTAACAACAT
Salmonella typhimurium LT2	STM0059	-227	4.2	TTGATGGGTAACAA
Salmonella typhimurium LT2	STM0623	-182	4.1	GTGAAATAAATCAA

Position: -160 Score: 4.7 Sequence: TTGATTTGGGTCAA Locus tag: null
	null	-160	4.7	TTGATTTGGGTCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ompW
Ortholog function: outer membrane protein W; colicin S4 receptor; putative transporter
Citrobacter koseri ATCC BAA-895	CKO_01333	-117	4.1	TTAATCTGGATCAA
Edwardsiella tarda EIB202	ETAE_1528	-157	4.9	TTGATGTCTATCAA
Enterobacter sp. 638	Ent638_2283	-117	4.1	TTAATCTGGATCAA
Erwinia amylovora ATCC 49946	EAM_1884	-160	5.4	TTGATCTAAATCAA
Erwinia carotovora subsp. atroseptica SCRI1043	ECA2303	-160	4.8	TTGATCTGGATCAA
Escherichia coli str. K-12 substr. MG1655	b1256	-162	4.8	TTGATTTAAATCAC
		-117	4.1	TTAATCCAGATCAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578	KPN_01248	-247	4.2	TTGATTTCACTCAT
		-80	4.1	TTAATCTGGATCAA
Photorhabdus luminescens subsp. laumondii TTO1	plu2478	-160	5	TTGATTTGGATCAA
Proteus mirabilis HI4320	PMI1350	-164	4.8	TTGATGTGGATCAA
Salmonella typhimurium LT2	STM1732	-117	4.1	TTAATCTGGATCAA
Serratia proteamaculans 568	Spro_2674	-131	5	TTGATTCAGATCAA
Yersinia pestis KIM	y2044	-171	3.6	ATGATAAATGGCAA
		-147	4.4	ATGATCCAGATCAA

Position: -34 Score: 4.5 Sequence: TTGACCGATATCAA Locus tag: null
	null	-34	4.5	TTGACCGATATCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: fnr
Ortholog function: Fumarate and nitrate reduction regulatory protein
Citrobacter koseri ATCC BAA-895	CKO_01409	-83	3.8	TTGATGTAAAGTAA
Edwardsiella tarda EIB202	ETAE_1744	-133	3.4	GTGCTATACATCAC
		-33	4.6	TTGACCGATATCAA
Enterobacter sp. 638	Ent638_1853	-33	4.6	TTGACCAATATCAA
Erwinia carotovora subsp. atroseptica SCRI1043	ECA2207	-34	4.6	TTGACCAATATCAA
Escherichia coli str. K-12 substr. MG1655	b1334	-33	4.7	TTGACAAATATCAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578	KPN_01530	-327	4.6	TTGACCAATATCAA
		-185	3.5	ATGAGCTTGATCAG
Photorhabdus luminescens subsp. laumondii TTO1	plu2179	-35	3.4	TTGAAGGATATGAA
Proteus mirabilis HI4320	PMI1203	-40	4.5	TTGACACATATCAA
Salmonella typhimurium LT2	STM1660.S	-33	4.7	TTGACAAATATCAA
Serratia proteamaculans 568	Spro_2582	-34	4.4	TTGACGCATATCAA
Yersinia pestis KIM	y2132	-32	4.4	TTGACGCATATCAA

Position: -116 Score: 4.3 Sequence: TTGATCGCTGTCAA Locus tag: null
	null	-116	4.3	TTGATCGCTGTCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: narG
Ortholog function: Respiratory nitrate reductase alpha chain (EC 1.7.99.4)
Erwinia carotovora subsp. atroseptica SCRI1043	ECA2031	-141	4.7	TTGATCGTTATCAA
Proteus mirabilis HI4320	PMI3571	-73	4.3
Serratia proteamaculans 568	Spro_2883	-140	4.7	TTGATCGCAATCAA

Position: -83 Score: 5.2 Sequence: TTGATGTATATCAA Locus tag: null
	null	-83	5.2	TTGATGTATATCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: narK
Ortholog function: Nitrate/nitrite antiporter
Erwinia carotovora subsp. atroseptica SCRI1043	ECA2030	-82	5	TTGATTTGCATCAA

Position: -153 Score: 5.4 Sequence: TTGATATAAATCAA Locus tag: null
	null	-153	5.4	TTGATATAAATCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ndh
Ortholog function: NADH dehydrogenase (EC 1.6.99.3)
Citrobacter koseri ATCC BAA-895	CKO_01946	-163	5.2	TTGATGTACATCAA
Edwardsiella tarda EIB202	ETAE_2070	-162	5.1	TTGATTTGAATCAA
Enterobacter sp. 638	Ent638_1624	-149	5.1	TTGATTCATATCAA
Erwinia amylovora ATCC 49946	EAM_1473	-146	4.2	TTGACCAGCATCAA
Erwinia carotovora subsp. atroseptica SCRI1043	ECA1815	-149	5.4	TTGATATATATCAA
Escherichia coli str. K-12 substr. MG1655	b1109	-150	5.2	TTGATTAACATCAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578	KPN_01106	-148	4.8	TTGATGCACATCAA
Photorhabdus luminescens subsp. laumondii TTO1	plu2821	-150	4.2	TTGATGTTGTTCAA
Proteus mirabilis HI4320	PMI0875	-153	5.5	TTGATATAAATCAA
Salmonella typhimurium LT2	STM1211	-150	4.8	TTGATGCACATCAA
Serratia proteamaculans 568	Spro_1926	-149	5.2	TTGATGTACATCAA
Yersinia pestis KIM	y1777	-148	5.4	TTGATATATATCAA

Position: -204 Score: 5.1 Sequence: TTGATATAAAACAA Position: -151 Score: 5 Sequence: TTGACTTATATCAA Locus tag: null
	null	-204	5.1	TTGATATAAAACAA
		-151	5	TTGACTTATATCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: yfiD
Ortholog function: Stress-induced alternate pyruvate formate-lyase subunit
Edwardsiella tarda EIB202	ETAE_2732	-27	4.3	TTGCTCTATCTCAA
Proteus mirabilis HI4320	PMI1898	-180	5.2	TTGATTTAAAACAA
		-127	5.1	TTGATATTTATCAA
Serratia proteamaculans 568	Spro_3682	-189	4.2	TTGACATAAAACAT
		-136	4.9	TTGACTTTAATCAA
Yersinia pestis KIM	y1282	-180	4.6	TTGATATAAAACAT
		-127	5.1	TTGATTTGAATCAA

Position: -306 Score: 5.1 Sequence: TTGATATAAGTCAA Position: -253 Score: 5.1 Sequence: TTGTTTTATATCAA Locus tag: null
	null	-306	5.1	TTGATATAAGTCAA
		-253	5.1	TTGTTTTATATCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ung
Ortholog function: Uracil-DNA glycosylase (EC 3.2.2.27)
Citrobacter koseri ATCC BAA-895	CKO_00204	-209	5.6	TTGATTTAAATCAA
		-156	5.1	TTGTTTTACATCAA
Edwardsiella tarda EIB202	ETAE_2734	-396	4.1	TTGAGATAGAGCAA
		-280	5.4	TTGATCTAAATCAA
		-227	4.7	ATGTTTTACATCAA
Enterobacter sp. 638	Ent638_3065	-194	5	TTGACCTAAATCAA
		-142	5.1	TTGTTTTATATCAA
		34	4.2	CTGATGAAAAACAA
Erwinia amylovora ATCC 49946	EAM_2526	-177	4.9	TTGATGCAAATCAA
Erwinia carotovora subsp. atroseptica SCRI1043	ECA3289	-228	5.1	TTGACTTAAATCAA
		-175	5.1	TTGTTTTATATCAA
Escherichia coli str. K-12 substr. MG1655	b2580	-197	5.6	TTGATTTAAATCAA
		-144	5.1	TTGTTTTACATCAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578	KPN_02903	-206	5.5	TTGATATAAATCAA
		-153	5.1	TTGTTTTACATCAA
Photorhabdus luminescens subsp. laumondii TTO1	plu3371	-233	4.1	TTGATTCAGAACAG
Proteus mirabilis HI4320	PMI1899	-221	5.1	TTGATAAATATCAA
		-168	5.2	TTGTTTTAAATCAA
Salmonella typhimurium LT2	STM2647	-208	5.6	TTGATTTAAATCAA
		-155	5.1	TTGTTTTACATCAA
Serratia proteamaculans 568	Spro_3683	-222	5	TTGATTAAAGTCAA
		-169	4.4	ATGTTTTATGTCAA
Yersinia pestis KIM	y1281	-213	5.2	TTGATTCAAATCAA
		-160	4.7	ATGTTTTATATCAA

Position: -176 Score: 3.6 Sequence: TTATTATGTGTCAA Locus tag: null
	null	-176	3.6	TTATTATGTGTCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: ydeJ
Ortholog function: Competence/damage-inducible protein CinA
Edwardsiella tarda EIB202	ETAE_2862	-5	3.4	TCGCTATGGAACAA
Enterobacter sp. 638	Ent638_3132	-81	4.1	TTCAGTAAAATCAA
Escherichia coli str. K-12 substr. MG1655	b1537	-195	3.5	TTGTTATAAGGCAT
		7	3.5	TTAATAGAGATAAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578	KPN_03032	-26	3.5	TTTATCCAGAGCAA
Proteus mirabilis HI4320	PMI0374	-19	3.5	TCGAGGTGAAACAA
Salmonella typhimurium LT2	STM2830	-347	3.3	TTGACCGCCGTCAT
Salmonella typhimurium LT2	STM1514	-238	3.6	GTCATATGCATCAA
Yersinia pestis KIM	y0880	-297	3.7	TTGATCGCAGTTAA

Position: -289 Score: 5 Sequence: TTGATATATGTCAA Locus tag: null
	null	-289	5	TTGATATATGTCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: arcA
Ortholog function: Aerobic respiration control protein arcA
Citrobacter koseri ATCC BAA-895	CKO_03387	-291	5.1	TTGATATATGTCAA
Edwardsiella tarda EIB202	ETAE_0561	-300	5.1	TTGATATATGTCAA
Enterobacter sp. 638	Ent638_0562	-291	5.1	TTGATATATGTCAA
Erwinia amylovora ATCC 49946	EAM_0640	-399	4.5	TTGATGCAGGTCAA
Erwinia carotovora subsp. atroseptica SCRI1043	ECA3893	-339	5.1	TTGATATATGTCAA
Escherichia coli str. K-12 substr. MG1655	b4401	-291	5.1	TTGATATATGTCAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578	KPN_04856	-291	5.1	TTGATATATGTCAA
Photorhabdus luminescens subsp. laumondii TTO1	plu0562	-282	4.9	TTGATGTACGTCAA
Proteus mirabilis HI4320	PMI3719	-343	4	ATTACATAAATCAA
		-282	4.6	TTGATATGTGTCAA
Salmonella typhimurium LT2	STM4598	-291	5.1	TTGATATATGTCAA
Serratia proteamaculans 568	Spro_0681	-299	5.1	TTGATATATGTCAA
Yersinia pestis KIM	y3721	-298	5.1	TTGATATATGTCAA

Position: -31 Score: 3.6 Sequence: TTTATTTAACTTAA Locus tag: null
	null	-31	3.6	TTTATTTAACTTAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: frdA
Ortholog function: Succinate dehydrogenase flavoprotein subunit (EC 1.3.99.1)
Citrobacter koseri ATCC BAA-895	CKO_03678	-151	4	TTAATCAGAATCAA
Enterobacter sp. 638	Ent638_0343	-31	3.6	TTGCGGAATAACAA
Photorhabdus luminescens subsp. laumondii TTO1	plu4124	-239	4.1
Proteus mirabilis HI4320	PMI3588	-208	4
Salmonella typhimurium LT2	STM4343	-191	4.4	TTAATCAAAATCAA
Serratia proteamaculans 568	Spro_0419	-63	3.7	TTTATAAATATTAA

Position: -2 Score: 3.7 Sequence: TCGTGATTAATCAA Locus tag: null
	null	-2	3.7	TCGTGATTAATCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: frdD
Ortholog function: Fumarate reductase subunit D
Citrobacter koseri ATCC BAA-895	CKO_03681	-151	4	TTAATCAGAATCAA
Enterobacter sp. 638	Ent638_0340	-31	3.6	TTGCGGAATAACAA
Photorhabdus luminescens subsp. laumondii TTO1	plu4127	-239	4.1
Proteus mirabilis HI4320	PMI3585	-208	4
Salmonella typhimurium LT2	STM4340	-191	4.4	TTAATCAAAATCAA
Serratia proteamaculans 568	Spro_0416	-63	3.7	TTTATAAATATTAA

Position: -148 Score: 4 Sequence: TTGAGTTTAATTAA Locus tag: null
	null	-148	4	TTGAGTTTAATTAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: aceB
Ortholog function: Malate synthase (EC 2.3.3.9)
Citrobacter koseri ATCC BAA-895	CKO_03906	-162	4.2	TTTATTGTTATCAA
Enterobacter sp. 638	Ent638_0218	-111	4	TTGATTTTAGAAAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578	KPN_04395	-154	4.1	TTCATTGTTATCAA
Photorhabdus luminescens subsp. laumondii TTO1	plu4396	-61	4
Proteus mirabilis HI4320	PMI2764	-64	4.2

Position: -78 Score: 4.7 Sequence: TTGTTCTTTATCAA Locus tag: null
	null	-78	4.7	TTGTTCTTTATCAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: glpA
Ortholog function: Anaerobic glycerol-3-phosphate dehydrogenase subunit A (EC 1.1.5.3)
Citrobacter koseri ATCC BAA-895	CKO_00536	-30	3.8	ATGATAAAAAACGA
Edwardsiella tarda EIB202	ETAE_3115	-78	4.1	TTGCTCCTTATCAA
Enterobacter sp. 638	Ent638_2805	-69	4.3	ATGTTCGAAATCAA
Erwinia carotovora subsp. atroseptica SCRI1043	ECA4165	-84	4.5	TTGCTCTTTATCAA
Escherichia coli str. K-12 substr. MG1655	b2241	-71	3.6	ATGCGCGAAATCAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578	KPN_02647	-71	4.1	ATGCTCGAAATCAA
Proteus mirabilis HI4320	PMI3592	-107	4.2	TTGCTCATTATCAA
Salmonella typhimurium LT2	STM2284	-30	3.8	ATGATAAAAAACGA
Serratia proteamaculans 568	Spro_0200	-74	4.3	TTGTTCCTTATCAA
Yersinia pestis KIM	y0404	-145	4.3	TTGATCACAATCAT
		-91	4.4	TTGTTTCTTATCAA

Position: -236 Score: 4.7 Sequence: TTGATAAAGAACAA Locus tag: null
	null	-236	4.7	TTGATAAAGAACAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: glpT
Ortholog function: Glycerol-3-phosphate transporter
Citrobacter koseri ATCC BAA-895	CKO_00537	-257	3.7	TCGTTTTTTATCAT
Edwardsiella tarda EIB202	ETAE_3116	-301	3.8	GTGATCAAAATCAC
Enterobacter sp. 638	Ent638_2804	-197	4.2	TTGATTTCGAACAT
Erwinia carotovora subsp. atroseptica SCRI1043	ECA4166	-249	4.3	TTGATAAAGAGCAA
Klebsiella pneumoniae subsp. pneumoniae MGH 78578	KPN_02646	-214	3.8	TTGATTTCGAGCAT
Photorhabdus luminescens subsp. laumondii TTO1	plu4119	-306	4.2	TTGATAAAGAACAG
Proteus mirabilis HI4320	PMI3591	-287	4	TTGATAATGAGCAA
		-45	4.9	TTGTTTAATATCAA
Salmonella typhimurium LT2	STM2283	-256	3.7	TCGTTTTTTATCAT
Serratia proteamaculans 568	Spro_0199	-305	4.3	TTGATAAGGAACAA

Position: -236 Score: 3.8 Sequence: GTGATATTAATCAC Locus tag: null
	null	-236	3.8	GTGATATTAATCAC
Supported by regulated orthologs from reference regulons
Ortholog gene name: ysgA
Ortholog function: Predcited carboxymethylenebutenolidase (EC 3.1.1.45)
Citrobacter koseri ATCC BAA-895	CKO_00172	-133	4.1	GTGATTTACATCAC
Erwinia amylovora ATCC 49946	EAM_0199	-199	3.6	TTAATCAAAATGAA
Erwinia carotovora subsp. atroseptica SCRI1043	ECA0184	-155	3.8	GTGACTTAAATCAC
Salmonella typhimurium LT2	STM3967	-169	4.2	ATGACGTAAAACAA
Serratia proteamaculans 568	Spro_0243	-174	3.8	TTAATGCAGGTCAA
Yersinia pestis KIM	y0443	-296	4.2	GTGATTTAAATCAC

Position: -183 Score: 3.5 Sequence: TTGCTAAATAAAAA Locus tag: null
	null	-183	3.5	TTGCTAAATAAAAA
Supported by regulated orthologs from reference regulons
Ortholog gene name: pstS
Ortholog function: Phosphate ABC transporter, periplasmic phosphate-binding protein PstS (TC 3.A.1.7.1)
Citrobacter koseri ATCC BAA-895	CKO_00065	-243	4.4	CTGTTTTTAATCAA
Edwardsiella tarda EIB202	ETAE_3538	-93	3.8	TTTACTGTCATCAA
Erwinia carotovora subsp. atroseptica SCRI1043	ECA4477	-52	3.6	CTGATTGATAACGA
Escherichia coli str. K-12 substr. MG1655	b3728	-138	3.8	CTTATTTAAATCAG
Photorhabdus luminescens subsp. laumondii TTO1	plu0214	-33	3.9	TTGTTGATTCTCAA
Proteus mirabilis HI4320	PMI2893	-46	4	TTGATAGATGTCGA

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --

Propagation of Fnr regulog to Dickeya dadantii 3937

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --