Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Propagation of Fur regulog to Shewanella denitrificans OS217

Reference regulog properties
Source regulog: Fur - Shewanellaceae
Regulator type: Transcription factor
Regulator family: FUR
Regulation mode: repressor (activator)
Biological process: Iron homeostasis
Effector: Iron ion, (Fe2+)
Phylum: Proteobacteria
Propagated regulon:
Target genome Shewanella denitrificans OS217
Orthologous TF(s) Sden_1593
Regulated genes 21
Built upon 505 sites [see more]
Predicted regulatory interactions in Shewanella denitrificans OS217
Locus tag Position Score Sequence
Position: -69
Score: 5.3
Sequence: AAATGATAATGAAAATCATTA
Locus tag: Sden_0590
Sden_0590 -69 5.3 AAATGATAATGAAAATCATTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: Sden_0590
Ortholog function: Putative siderophore biosynthesis protein, related to cysteine synthase
Shewanella denitrificans OS217 Sden_0590 -69 5.3 AAATGATAATGAAAATCATTA
-63 5 TAATGAAAATCATTACCAGTC
Position: -101
Score: 5.3
Sequence: AAACGCTAACAATTCTCATTA
Locus tag: Sden_0609
Sden_0609 -101 5.3 AAACGCTAACAATTCTCATTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: Sfri_3851
Ortholog function: TonB-dependent siderophore receptor
Shewanella denitrificans OS217 Sden_0609 -101 5.3 AAACGCTAACAATTCTCATTA
Shewanella frigidimarina NCIMB 400 Sfri_3851 -309 5.8 AAATGAGAATAATTATCAAAA
Shewanella piezotolerans WP3 swp_0083 -206 5.6 AAATGATAATTATTACGATTT
-46 5 AAATGAGAACAATTGGCATCC
Position: -92
Score: 5.2
Sequence: AAATGAGAGTGATTTGCAATT
Locus tag: Sden_0621
Sden_0621 -92 5.2 AAATGAGAGTGATTTGCAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: viuA
Ortholog function: TonB-dependent receptor
Shewanella oneidensis MR-1 SO4516 -100 5.8 AAATGATATTGGTTATCAATT
Shewanella putrefaciens CN-32 Sputcn32_0330 -101 5.6 AAATGATAATCCTTCTCAGTT
Shewanella sp W3-18-1 Sputw3181_3878 -101 5.6 AAATGATAATCCTTCTCAGTT
Shewanella sp ANA-3 Shewana3_3923 -99 5.8 AAATGATATTGGTTATCATCT
Shewanella sp MR-4 Shewmr4_3727 -99 6 AAATGATATTGGTTATCATTT
Shewanella sp MR-7 Shewmr7_3798 -99 6 AAATGATATTGGTTATCATTT
Shewanella denitrificans OS217 Sden_0621 -92 5.2 AAATGAGAGTGATTTGCAATT
Shewanella piezotolerans WP3 swp_0161 -104 5.3 AAATGTGAATGATTCGCAATT
Position: -91
Score: 5.1
Sequence: AAATACGAATAGTTTGCATTA
Locus tag: Sden_0638
Sden_0638 -91 5.1 AAATACGAATAGTTTGCATTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: Sfri_4035
Ortholog function: Conserved hypothetical signal peptide protein, possibly porin
Shewanella baltica OS155 Sbal_2014 -93 5.4 AAATGCGAATTGTTTGCATTA
Shewanella denitrificans OS217 Sden_0638 -91 5.1 AAATACGAATAGTTTGCATTA
Shewanella frigidimarina NCIMB 400 Sfri_4035 -106 5.6 TAATGATAATGGTTTGCATTA
Shewanella amazonensis SB2B Sama_0589 -84 5.1 CAATGCGAATCGTTTGCATTT
Shewanella loihica PV-4 Shew_3120 -84 5.7 TAATGATAATAGTTTGCATTA
Shewanella pealeana ATCC 700345 Spea_0712 -82 5.6 TAATGATAACGATTTGCATTA
Shewanella piezotolerans WP3 swp_4367 -81 6 AAATGAGAATAATTTGCATTA
Shewanella sediminis HAW-EB3 Ssed_3889 -83 5.6 AAATGATAACCGTTTGCATTA
Shewanella woodyi ATCC 51908 Swoo_3788 -83 5.4 GAATGATAACAATTTGCATTA
Position: -74
Score: 5.8
Sequence: TAATGCAAATTGTTATCATTT
Locus tag: Sden_0721
Sden_0721 -74 5.8 TAATGCAAATTGTTATCATTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: Sfri_0810
Ortholog function: Hypothetical protein
Shewanella denitrificans OS217 Sden_0721 -74 5.8 TAATGCAAATTGTTATCATTT
Shewanella frigidimarina NCIMB 400 Sfri_0810 -78 5.6 TAATGCGAATCGTTATCAATT
Shewanella loihica PV-4 Shew_0675 -77 6 TAATGCAAATTATTCTCATTT
Shewanella pealeana ATCC 700345 Spea_0670 -100 5.7 TAATGTAAATCATTCTCATTT
Shewanella halifaxensis HAW-EB4 Shal_3528 -100 5.7 TAATGTAAATCATTCTCATTT
Shewanella piezotolerans WP3 swp_4049 -86 5.8 TAATGCAAATCGTTCTCATTT
Shewanella sediminis HAW-EB3 Ssed_3793 -76 5.1 TAATGCAAACGATTCGTATTT
Shewanella woodyi ATCC 51908 Swoo_0790 -79 5.8 TAATGAAAACGATTCGCATTT
Position: -66
Score: 6.5
Sequence: AAATGAAAATCATTATCATTT
Locus tag: Sden_0789
Sden_0789 -66 6.5 AAATGAAAATCATTATCATTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: tonB
Ortholog function: TonB mediated energy transduction system, energy transducer component, TonB
Shewanella oneidensis MR-1 SO3670 -97 5.7 AAATAGAAATCATTATCATTT
Shewanella putrefaciens CN-32 Sputcn32_0965 -75 6.1 AAATGGTAATCATTATCATTT
Shewanella sp W3-18-1 Sputw3181_3202 -75 6.1 AAATGGTAATCATTATCATTT
Shewanella sp ANA-3 Shewana3_3236 -98 6 AAATGGAAATCATTATCATTT
Shewanella baltica OS155 Sbal_0951 -63 6.1 AAATGCAAATCATTATCATTT
Shewanella denitrificans OS217 Sden_0789 -66 6.5 AAATGAAAATCATTATCATTT
Shewanella pealeana ATCC 700345 Spea_3328 -206 6.5 AAATGAAAATCATTATCATTT
Shewanella halifaxensis HAW-EB4 Shal_3400 -207 6.5 AAATGAAAATCATTATCATTT
Shewanella piezotolerans WP3 swp_3979 -183 6.5 AAATGAAAATCATTATCATTT
Shewanella woodyi ATCC 51908 Swoo_4005 -80 6.5 AAATGAAAATCATTATCATTT
Position: -133
Score: 6.5
Sequence: AAATGATAATGATTTTCATTT
Locus tag: Sden_0790
Sden_0790 -133 6.5 AAATGATAATGATTTTCATTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: hmuA
Ortholog function: TonB-dependent haem/haemoglobin receptor, HmuA
Shewanella oneidensis MR-1 SO3669 -169 5.7 AAATGATAATGATTTCTATTT
Shewanella putrefaciens CN-32 Sputcn32_0966 -178 6.1 AAATGATAATGATTACCATTT
Shewanella sp W3-18-1 Sputw3181_3201 -178 6.1 AAATGATAATGATTACCATTT
Shewanella sp ANA-3 Shewana3_3235 -171 6 AAATGATAATGATTTCCATTT
Shewanella baltica OS155 Sbal_0952 -284 6.1 AAATGATAATGATTTGCATTT
Shewanella denitrificans OS217 Sden_0790 -133 6.5 AAATGATAATGATTTTCATTT
Shewanella pealeana ATCC 700345 Spea_3327 -143 6.5 AAATGATAATGATTTTCATTT
Shewanella halifaxensis HAW-EB4 Shal_3399 -144 6.5 AAATGATAATGATTTTCATTT
Shewanella piezotolerans WP3 swp_3978 -143 6.5 AAATGATAATGATTTTCATTT
Shewanella woodyi ATCC 51908 Swoo_4004 -113 6.5 AAATGATAATGATTTTCATTT
Position: -120
Score: 5.6
Sequence: TAATGATAATGGTTATCACTA
Locus tag: Sden_0990
Sden_0990 -120 5.6 TAATGATAATGGTTATCACTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: bfr2
Ortholog function: Bacterioferritin subunit 2
Shewanella oneidensis MR-1 SO1111 -125 5.2 TAATGAGAATGCTTTTAATTA
Shewanella putrefaciens CN-32 Sputcn32_0948 -126 5.5 AAATGAGAATGGTTTTTATAA
Shewanella sp W3-18-1 Sputw3181_3228 -126 5.5 AAATGAGAATGGTTTTTATAA
Shewanella sp ANA-3 Shewana3_0946 -125 5.4 TAATGAGAATGCTTTTTATCT
Shewanella sp MR-4 Shewmr4_0944 -124 5.4 TAATGAGAATGCTTTTTATCT
Shewanella sp MR-7 Shewmr7_0982 -125 5.4 TAATGAGAATGCTTTTTATCT
Shewanella baltica OS155 Sbal_0932 -126 5.3 AAATGAGAATGGTTGTTATCA
Shewanella denitrificans OS217 Sden_0990 -120 5.6 TAATGATAATGGTTATCACTA
Shewanella frigidimarina NCIMB 400 Sfri_0957 -121 6 TAATGATAATAGTTATCAATT
Shewanella amazonensis SB2B Sama_2530 -122 4.7 CAATAAGAATAATTAGCCTTT
Shewanella loihica PV-4 Shew_2873 -115 4.8 GAATGAGAACGATTTTCTTTG
Shewanella pealeana ATCC 700345 Spea_3095 -116 5.4 TAATGAGAATGGTTATCTTTA
Shewanella halifaxensis HAW-EB4 Shal_3179 -121 4.3 TAGTGATAATGAAAATCACTA
-88 4.3 TGTTGATATTTAACCTTATTT
Shewanella piezotolerans WP3 swp_1175 -118 5.5 TAATGATAATAATTATCTTTA
Shewanella sediminis HAW-EB3 Ssed_2230 -137 4.6 TAATGGGAATGATTATCTCTA
Shewanella woodyi ATCC 51908 Swoo_3608 -167 4.5 AAATGATAATGCTTAATGTTA
Position: -48
Score: 5.2
Sequence: CTATGATAATCATTATCATTC
Locus tag: Sden_1445
Sden_1445 -48 5.2 CTATGATAATCATTATCATTC
Supported by regulated orthologs from reference regulons
Ortholog gene name: SO1482
Ortholog function: TonB-dependent receptor
Shewanella oneidensis MR-1 SO1482 -49 5 GGATGGAAATCATTATCATTC
Shewanella putrefaciens CN-32 Sputcn32_1237 -49 4.7 AAATACAAATCATTACTATTC
Shewanella sp W3-18-1 Sputw3181_2867 -49 4.7 AAATACAAATCATTACTATTC
Shewanella sp ANA-3 Shewana3_2944 -48 5.8 AGATGAAAATCATTATCATTC
Shewanella sp MR-4 Shewmr4_2768 -48 5.8 AGATGAAAATCATTATCATTC
Shewanella sp MR-7 Shewmr7_2846 -48 5.8 AGATGAAAATCATTATCATTC
Shewanella baltica OS155 Sbal_1315 -49 5 AAATGCAAATCATTACTATTC
Shewanella denitrificans OS217 Sden_1445 -48 5.2 CTATGATAATCATTATCATTC
Shewanella frigidimarina NCIMB 400 Sfri_2440 -52 5.6 TTATGATAATCATTATCATTC
Shewanella loihica PV-4 Shew_2690 -51 6 TATTGATAATCGTTATCATTT
Shewanella pealeana ATCC 700345 Spea_2930 -51 6 TAATGATAATCGTTATCATCT
Shewanella halifaxensis HAW-EB4 Shal_3021 -51 5.6 TAATAAGAATCGTTATCATCT
Shewanella piezotolerans WP3 swp_3568 -51 5.8 TAATGATAATGGTTATCATCA
Shewanella sediminis HAW-EB3 Ssed_3242 -49 5.5 AAATGCAAATCGTTATCATTC
Shewanella woodyi ATCC 51908 Swoo_3375 -51 6 TAATGATAATCGTTATCATCT
Position: -44
Score: 5.2
Sequence: AAATAGGAATAATTAGCATTA
Locus tag: Sden_1592
Sden_1592 -44 5.2 AAATAGGAATAATTAGCATTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: SO2039
Ortholog function: Signalling protein with EAL domain
Shewanella oneidensis MR-1 SO2039 -44 5.6 AAATGCGAATAATTAGCAATT
Shewanella putrefaciens CN-32 Sputcn32_2106 -48 4.9 AAATGCAAATAATAAGCAATT
Shewanella sp W3-18-1 Sputw3181_1906 -48 4.9 AAATGCAAATAATAAGCAATT
Shewanella sp ANA-3 Shewana3_2237 -44 5 AAATGCGAATAATTAGCGATT
Shewanella sp MR-4 Shewmr4_2112 -42 5 AAATGCGAATAATTAGCGATT
Shewanella sp MR-7 Shewmr7_1862 -44 5.6 AAATGCGAATAATTAGCAATT
Shewanella baltica OS155 Sbal_2274 -46 5.3 AAATGCGAATAATTAGTATTA
Shewanella baltica OS155 Sbal_4560 -46 5.3 AAATGCGAATAATTAGTATTA
Shewanella denitrificans OS217 Sden_1592 -44 5.2 AAATAGGAATAATTAGCATTA
Shewanella amazonensis SB2B Sama_1896 -42 5.5 TAATGAGATTTATTTGCATTA
Shewanella halifaxensis HAW-EB4 Shal_1861 -35 5.2 TAATATAAACAATTATCATTT
Shewanella piezotolerans WP3 swp_2763 29 5.6 TAATGTTAATAATTATCATTA
Shewanella sediminis HAW-EB3 Ssed_1968 -56 5 TAATGTGAATAATTACTATTT
Position: -36
Score: 6
Sequence: AAATAAAAACCATTCTCATTT
Locus tag: Sden_1854
Sden_1854 -36 6 AAATAAAAACCATTCTCATTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: Sfri_2008
Ortholog function: Hypothetical protein
Shewanella putrefaciens CN-32 Sputcn32_1997 -63 5.9 TGTTGATAATAATTATCATTT
Shewanella sp MR-4 Shewmr4_2003 -59 5.7 TGTTGATAACTATTCTCATTT
Shewanella sp MR-7 Shewmr7_1972 -59 5.7 TGTTGATAACTATTCTCATTT
Shewanella baltica OS155 Sbal_4484 -165 4.7 AAATAAAAATAATGATCACAT
-63 5.6 TGTTGATAACAGTTATCATTT
Shewanella baltica OS155 Sbal_2198 -165 4.7 AAATAAAAATAATGATCACAT
-63 5.6 TGTTGATAACAGTTATCATTT
Shewanella denitrificans OS217 Sden_1854 -36 6 AAATAAAAACCATTCTCATTT
Shewanella frigidimarina NCIMB 400 Sfri_2008 -116 6 AATTGATAACTATTCTCATTA
Shewanella amazonensis SB2B Sama_1788 -52 6 ATATGATAACTATTCTCATTT
Shewanella pealeana ATCC 700345 Spea_2212 -117 6.1 TATTGATAATCATTATCATTT
Shewanella halifaxensis HAW-EB4 Shal_2195 -62 5.9 TGTTGATAATCATTCTCATTT
Shewanella sediminis HAW-EB3 Ssed_2208 -64 5.8 CATTGATAATCATTCTCATTT
Shewanella woodyi ATCC 51908 Swoo_2428 -62 5.9 AGTTGATAACCATTCTCATTT
Position: 10
Score: 5.6
Sequence: TAATGAAAATGGTTATCGTTT
Locus tag: Sden_1906
Sden_1906 10 5.6 TAATGAAAATGGTTATCGTTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SO2426
Ortholog function: Two component transcriptional regulator, Winged helix family
Shewanella oneidensis MR-1 SO2426 -2 5.6 AAATGATATTGATTCTCGTTT
Shewanella putrefaciens CN-32 Sputcn32_1941 -2 5.5 AAATGATATCGATTCTCGTTT
Shewanella sp W3-18-1 Sputw3181_2064 -2 5.5 AAATGATATCGATTCTCGTTT
Shewanella sp ANA-3 Shewana3_1959 -32 5.6 AAATGATATTGATTCTCGTTT
Shewanella sp MR-4 Shewmr4_1904 -32 5.6 AAATGATATTGATTCTCGTTT
Shewanella sp MR-7 Shewmr7_2074 -32 5.6 AAATGATATTGATTCTCGTTT
Shewanella baltica OS155 Sbal_2050 -32 5.1 AAATGATATAGATTCTCGTTT
Shewanella denitrificans OS217 Sden_1906 10 5.6 TAATGAAAATGGTTATCGTTT
Shewanella frigidimarina NCIMB 400 Sfri_2150 -32 5.6 TAATGGTAATCGTTATCATTA
Shewanella amazonensis SB2B Sama_1718 -32 4.8 GAATAACAACCGTTCGCATTT
Shewanella loihica PV-4 Shew_1936 -31 6 TAATGATAACTATTATCATTA
Shewanella pealeana ATCC 700345 Spea_2236 -34 5.3 TAATGCGAATTATTCGTATTT
Shewanella halifaxensis HAW-EB4 Shal_2220 -34 5.6 AAATGAAAATGATTCGCATTG
Shewanella piezotolerans WP3 swp_2595 -9 5.5 CAATGATAATTGTTCGCATTT
Shewanella sediminis HAW-EB3 Ssed_2316 -34 5.5 AAATGATAACAGTTCGTATTT
Shewanella woodyi ATCC 51908 Swoo_2294 -36 5.4 TGTTGATAATTGTTCGCATTT
Position: -58
Score: 5.8
Sequence: TATTGAGATTCATTATCATTT
Locus tag: Sden_2159
Sden_2159 -58 5.8 TATTGAGATTCATTATCATTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: Sden_2159
Ortholog function: TonB-dependent receptor
Shewanella denitrificans OS217 Sden_2159 -58 5.8 TATTGAGATTCATTATCATTT
Position: -75
Score: 5.2
Sequence: GAATAAAAACAGTTCTCAATT
Locus tag: Sden_2355
Sden_2355 -75 5.2 GAATAAAAACAGTTCTCAATT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SO3406
Ortholog function: Conserved hypothetical protein
Shewanella denitrificans OS217 Sden_2355 -75 5.2 GAATAAAAACAGTTCTCAATT
Shewanella amazonensis SB2B Sama_3409 -72 5.8 AATTGAGAATGTTTATCATTT
Position: -116
Score: 5.4
Sequence: AATTGAAAACTATTATCGTTA
Locus tag: Sden_2415
Sden_2415 -116 5.4 AATTGAAAACTATTATCGTTA
Supported by regulated orthologs from reference regulons
Ortholog gene name: feoA
Ortholog function: Ferrous iron transport protein A
Shewanella oneidensis MR-1 SO1783 -121 5.4 AATTGAAAACTATTATCGTTA
Shewanella putrefaciens CN-32 Sputcn32_1480 -123 5.4 AATTGAAAACTATTATCGTTA
Shewanella sp W3-18-1 Sputw3181_2621 -123 5.4 AATTGAAAACTATTATCGTTA
Shewanella sp ANA-3 Shewana3_2671 -121 5.4 AATTGAAAACTATTATCGTTA
Shewanella sp MR-4 Shewmr4_2505 -121 5.4 AATTGAAAACTATTATCGTTA
Shewanella sp MR-7 Shewmr7_2573 -121 5.4 AATTGAAAACTATTATCGTTA
Shewanella baltica OS155 Sbal_1594 -121 5.4 AATTGAAAACTATTATCGTTA
Shewanella denitrificans OS217 Sden_2415 -116 5.4 AATTGAAAACTATTATCGTTA
Shewanella frigidimarina NCIMB 400 Sfri_2617 -111 5.1 AACTGAAAACTATTCTCGTTA
Shewanella amazonensis SB2B Sama_1214 -119 5.6 AATTGAAAATTATTATCGTTA
Shewanella loihica PV-4 Shew_2518 -192 5.8 CAATGAAAATGGTTCTCATTT
-123 5.7 AATTGAAAATTATTATCGTTT
Shewanella pealeana ATCC 700345 Spea_2691 -191 5.1 AAATAGTAACCATTCTTAATT
-126 5.7 AATTGAAAATTATTATCGTTT
Shewanella halifaxensis HAW-EB4 Shal_2777 -126 5.7 AATTGAAAATTATTATCGTTT
Shewanella piezotolerans WP3 swp_3271 -225 5.3 AAATAATAACCATTACTATTT
-125 5.7 AATTGAAAATTATTATCGTTT
Shewanella sediminis HAW-EB3 Ssed_1531 -219 4.9 GAGCGATAATCATTCTCATCT
-126 5.6 AATTGAAAACTATTCTCGTTT
Shewanella woodyi ATCC 51908 Swoo_3123 -218 4.8 TAGTGATAATCGTTCTCACAA
-125 5.6 AATTGAAAACTATTATCGTTT
Position: -172
Score: 5.5
Sequence: AACTGATAATCATTCTCATTG
Locus tag: Sden_2503
Sden_2503 -172 5.5 AACTGATAATCATTCTCATTG
Supported by regulated orthologs from reference regulons
Ortholog gene name: SO1580
Ortholog function: TonB-dependent heme receptor
Shewanella oneidensis MR-1 SO1580 -82 5.5 ATGTGAGAATTATTCTCATCT
Shewanella putrefaciens CN-32 Sputcn32_1308 -84 5.6 AATTGAGAACTATTCTTATCT
Shewanella sp W3-18-1 Sputw3181_2795 -84 5.6 AATTGAGAACTATTCTTATCT
Shewanella sp ANA-3 Shewana3_2862 -81 5.6 AGGTGAGAATTATTCTCATCT
Shewanella baltica OS155 Sbal_1397 -84 5.4 AAGTGAGAACTATTCTTATCT
Shewanella denitrificans OS217 Sden_2503 -172 5.5 AACTGATAATCATTCTCATTG
Shewanella piezotolerans WP3 swp_0953 -76 5.7 AAGTGATAATCATTATCATTC
Position: -122
Score: 6.2
Sequence: AAATAATAATGATTATCATTT
Locus tag: Sden_3064
Sden_3064 -122 6.2 AAATAATAATGATTATCATTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: Sden_3064
Ortholog function: TonB-dependent receptor
Shewanella putrefaciens CN-32 Sputcn32_0603 -91 5.1 AAATAACAATAACTATCATTA
Shewanella putrefaciens CN-32 Sputcn32_0603 -91 5.1 AAATAACAATAACTATCATTA
Shewanella sp W3-18-1 Sputw3181_3569 -91 5.1 AAATAACAATAACTATCATTA
Shewanella sp W3-18-1 Sputw3181_3569 -91 5.1 AAATAACAATAACTATCATTA
Shewanella denitrificans OS217 Sden_3064 -122 6.2 AAATAATAATGATTATCATTT
Shewanella denitrificans OS217 Sden_3064 -122 6.2 AAATAATAATGATTATCATTT
Shewanella frigidimarina NCIMB 400 Sfri_3717 -90 5.7 AAATGATAATGATTTCTATTT
Shewanella frigidimarina NCIMB 400 Sfri_2549 -195 5 GATTGATAACGAATCTCAATA
-168 5.5 GAGTGATAATTATTATCAATT
-91 5.6 TAATGATAATCATTAGCAATA
Shewanella frigidimarina NCIMB 400 Sfri_3717 -90 5.7 AAATGATAATGATTTCTATTT
Shewanella frigidimarina NCIMB 400 Sfri_2549 -195 5 GATTGATAACGAATCTCAATA
-168 5.5 GAGTGATAATTATTATCAATT
-91 5.6 TAATGATAATCATTAGCAATA
Shewanella loihica PV-4 Shew_3097 -136 5.9 AAATGATAACCATTCCCATTT
Shewanella loihica PV-4 Shew_3097 -136 5.9 AAATGATAACCATTCCCATTT
Position: -99
Score: 5.7
Sequence: CAATGATAACCGTTTTCATTT
Locus tag: Sden_3217
Sden_3217 -99 5.7 CAATGATAACCGTTTTCATTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: bfd
Ortholog function: Bacterioferritin-associated ferredoxin
Shewanella oneidensis MR-1 SO0583 -55 5.3 ATTTGATAAGCGTTTTCATTT
Shewanella putrefaciens CN-32 Sputcn32_3295 -54 5.3 ATTTGATAAGCGTTTTCATTT
Shewanella sp W3-18-1 Sputw3181_0646 -54 5.3 ATTTGATAAGCGTTTTCATTT
Shewanella sp ANA-3 Shewana3_0581 -54 5.3 ATTTGATAAGCGTTTTCATTT
Shewanella sp MR-4 Shewmr4_0582 -54 5.3 ATTTGATAAGCGTTTTCATTT
Shewanella sp MR-7 Shewmr7_3448 -54 5.3 ATTTGATAAGCGTTTTCATTT
Shewanella baltica OS155 Sbal_0542 -53 5.3 ATTTGATAAGCGTTTTCATTT
Shewanella denitrificans OS217 Sden_3217 -99 5.7 CAATGATAACCGTTTTCATTT
Shewanella frigidimarina NCIMB 400 Sfri_3324 -76 5.7 CAATGATAACCGTTTTCATTT
Shewanella amazonensis SB2B Sama_3040 -59 5.5 TGATGAGAACGGTTTTTATTT
Shewanella pealeana ATCC 700345 Spea_3555 -58 5.8 CATTGAGAATCATTTTCATTT
Shewanella halifaxensis HAW-EB4 Shal_3649 -58 5.5 CACTGAGAATCATTTTCATTT
Shewanella piezotolerans WP3 swp_0771 -86 5.3 GATTGATAACTATTCTCATCA
-57 5.6 CATTGAGAATCGTTTTCATTT
Position: -123
Score: 4.7
Sequence: AAATAAGACTGGTTTGTATTT
Locus tag: Sden_3594
Sden_3594 -123 4.7 AAATAAGACTGGTTTGTATTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SO4700
Ortholog function: Hypothetical outer membrane protein
Shewanella oneidensis MR-1 SO4700 -86 5.3 AAATCAAATCCATTCTCATTA
Shewanella sp ANA-3 Shewana3_4052 -86 4.8 AAATCGAATCCATTCTCATTA
Shewanella sp MR-4 Shewmr4_3843 -27 5.3 AAATCAAATCCATTCTCATTA
Shewanella sp MR-7 Shewmr7_3936 -27 5.3 AAATCAAATCCATTCTCATTA
Shewanella baltica OS155 Sbal_0123 -86 4.5 AAATCGAATCAATTCGCATTA
Shewanella denitrificans OS217 Sden_3594 -123 4.7 AAATAAGACTGGTTTGTATTT
Shewanella frigidimarina NCIMB 400 Sfri_3875 -80 5.3 AAACGAGACTGATTATCATTT
Shewanella loihica PV-4 Shew_3658 -83 5.3 AAATGCAACCAATTCTCATTT
Shewanella pealeana ATCC 700345 Spea_4066 7 5 AAATACGAGCTATTATCATTT
Shewanella halifaxensis HAW-EB4 Shal_0192 -87 4.4 AAATACGTCCCATTATCATTT
Shewanella piezotolerans WP3 swp_4927 -86 5 AAATACAACCGATTATCATTT
Shewanella sediminis HAW-EB3 Ssed_0144 -97 5.5 AAATGGGAAGTGTTATCATTT
Shewanella woodyi ATCC 51908 Swoo_0123 -85 5.2 AAATACAAAGCGTTATCATTT
Position: -50
Score: 6
Sequence: TATTGATAACGATTATCATTT
Locus tag: Sden_3706
Sden_3706 -50 6 TATTGATAACGATTATCATTT
Supported by regulated orthologs from reference regulons
Ortholog gene name: SO4740
Ortholog function: Conserved hypothetical inner membrane protein
Shewanella oneidensis MR-1 SO4740 -60 6 TAATGAGAATTGTTATCATCT
Shewanella putrefaciens CN-32 Sputcn32_3921 -59 6 TAATGAGAATTGTTATCATCT
Shewanella sp W3-18-1 Sputw3181_4047 -59 6 TAATGAGAATTGTTATCATCT
Shewanella sp ANA-3 Shewana3_4124 -60 6 TAATGAGAATTGTTATCATCT
Shewanella sp MR-4 Shewmr4_3919 -60 6 TAATGAGAATTGTTATCATCT
Shewanella sp MR-7 Shewmr7_4011 -60 6 TAATGAGAATTGTTATCATCT
Shewanella baltica OS155 Sbal_4341 -59 6 TAATGAGAATTGTTATCATCT
Shewanella denitrificans OS217 Sden_3706 -50 6 TATTGATAACGATTATCATTT
Shewanella frigidimarina NCIMB 400 Sfri_4031 -46 6 TAATGAGAACTGTTATCATTT
Shewanella amazonensis SB2B Sama_3636 -50 5.9 AAGTGATAACTATTATCATTT
Shewanella loihica PV-4 Shew_3815 -46 6.5 AAATGATAATAATTATCATTT
Shewanella pealeana ATCC 700345 Spea_4226 -47 5.9 AAATGAGAAGCGTTATCATTT
Shewanella halifaxensis HAW-EB4 Shal_4274 -47 6.3 AAATGATAACCATTATCATTT
Shewanella piezotolerans WP3 swp_5137 -46 6.1 AAATGATAATCGTTATCATCT
Shewanella sediminis HAW-EB3 Ssed_4479 -47 6.1 AGATGAGAATAGTTATCATTT
Shewanella woodyi ATCC 51908 Swoo_4887 -50 6.3 AAATGAGAACCATTATCATTT
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