Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Orthologous regulated operons containing Sden_3064 gene

Properties
Regulog: Fur - Shewanellaceae
Regulator type: Transcription factor
Regulator family: FUR
Regulation mode: repressor (activator)
Biological process: Iron homeostasis
Effector: Iron ion, (Fe2+)
Phylum: Proteobacteria
Built upon 505 sites [see more]
Orthologous operons
Operon Position Score Sequence Locus Tag of the First Gene
Shewanella amazonensis SB2B
Position: -65
Score: 6.03039
Sequence: TAATGATAATTATTTTTATTT
Locus tag: Sama_3412
Name: Sden_3064
Funciton: TonB-dependent receptor
Locus tag: Sama_3413
Name: piuB
Funciton: Uncharacterized iron-regulated membrane protein, PiuB
Sden_3064-piuB -65 6 TAATGATAATTATTTTTATTT Sama_3412
Shewanella denitrificans OS217
Position: -122
Score: 6.20539
Sequence: AAATAATAATGATTATCATTT
Locus tag: Sden_3064
Name: Sden_3064
Funciton: TonB-dependent receptor
Locus tag: Sden_3065
Name: piuB
Funciton: Uncharacterized iron-regulated membrane protein, PiuB
Sden_3064-piuB -122 6.2 AAATAATAATGATTATCATTT Sden_3064
Shewanella frigidimarina NCIMB 400
Position: -195
Score: 5.00536
Sequence: GATTGATAACGAATCTCAATA
Position: -168
Score: 5.46857
Sequence: GAGTGATAATTATTATCAATT
Position: -91
Score: 5.61222
Sequence: TAATGATAATCATTAGCAATA
Locus tag: Sfri_2549
Name: Sden_3064
Funciton: TonB-dependent receptor
Sden_3064 -195 5 GATTGATAACGAATCTCAATA Sfri_2549
-168 5.5 GAGTGATAATTATTATCAATT
-91 5.6 TAATGATAATCATTAGCAATA
Shewanella loihica PV-4
Position: -136
Score: 5.88532
Sequence: AAATGATAACCATTCCCATTT
Locus tag: Shew_3097
Name: Sden_3064
Funciton: TonB-dependent receptor
Sden_3064 -136 5.9 AAATGATAACCATTCCCATTT Shew_3097
Shewanella putrefaciens CN-32
Position: -91
Score: 5.12315
Sequence: AAATAACAATAACTATCATTA
Locus tag: Sputcn32_0603
Name: Sden_3064
Funciton: TonB-dependent receptor
Sden_3064 -91 5.1 AAATAACAATAACTATCATTA Sputcn32_0603
Shewanella sp W3-18-1
Position: -91
Score: 5.12315
Sequence: AAATAACAATAACTATCATTA
Locus tag: Sputw3181_3569
Name: Sden_3064
Funciton: TonB-dependent receptor
Sden_3064 -91 5.1 AAATAACAATAACTATCATTA Sputw3181_3569
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