Regulons of Deinococcus deserti VCD115

Allows to visualize regulome content in the context of metabolic pathways



Type	Regulator	Effector	Pathway	Operons	Sites
TF	ArgR	Arginine	Arginine biosynthesis	5	4
TF	BglR	Beta-glucoside	Beta-glucosides utilization	1	1
TF	DR2501		Sugar utilization	3	2
TF	PaaR2	Phenylacetyl-CoA	Phenylacetic acid degradation	9	8
TF	PdxR2	Pyridoxal-5-phosphate	Pyridoxine/pyridoxal homeostasis	1	1
TF	Rex	NADH	Energy metabolism	3	3
RNA	Cobalamin	Adenosylcobalamin	Cobalamin biosynthesis	3	2
RNA	FMN	Flavin mononucleotide	Riboflavin biosynthesis	2	1
RNA	GEMM_RNA_motif	Cyclic diguanylate	Second messenger response	3	3
RNA	L10_leader		Ribosome biogenesis	1	1
RNA	SAM	S-adenosylmethionine	Methionine biosynthesis	3	3
RNA	T-box(Gly)	Gly-tRNA	Amino acid metabolism	1	1
RNA	T-box(Ile)	Ile-tRNA	Amino acid metabolism	1	1
RNA	T-box(Val)	Val-tRNA	Amino acid metabolism	1	1
RNA	TPP	Thiamine pyrophosphate	Thiamine biosynthesis	2	2
RNA	glmS	Glucosamine-6-phosphate	Amino sugar metabolism	1	1
RNA	yybP-ykoY			2	1

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	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --