Regulon of GEMM_RNA_motif in Deinococcus deserti VCD115
| Regulator type: | RNA regulatory element |
| Name: | GEMM_RNA_motif |
| RFAM: | RF01051 |
| Regulation mode: | |
| Biological process: | Second messenger response |
| Effector: | Cyclic diguanylate |
| Regulog: | GEMM_RNA_motif - Deinococcus-Thermus |
| Under regulation: | |
| - Genes | 3 |
| - Operons | 3 |
Member of regulog collections
- By taxonomy - Deinococcus-Thermus
- By RNA motif - GEMM_RNA_motif
- By effector - Cyclic diguanylate
- By pathway - Second messenger response
| Locus Tag | Name | Function | |
|---|---|---|---|
|
Position: -91
Score: 47.6 Sequence: ACACCGAAAAAGGCA...
Locus tag: Deide_1p01370
Name: Deide_1p01370 Funciton: Pectin lyase fold protein |
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Deide_1p01370
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Pectin lyase fold protein
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Position: -257
Score: 46 Sequence: AAACCGAAAAAGGCA...
Locus tag: Deide_1p00130
Name: licB Funciton: Beta-glucanase (putative lichenase) (3.2.1.73) |
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licB
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Beta-glucanase (putative lichenase) (3.2.1.73)
|
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Position: -205
Score: 46 Sequence: AAACCGAAAAAGGCA...
Locus tag: Deide_1p01250
Name: licB Funciton: Beta-glucanase (putative lichenase) (3.2.1.73) |
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licB
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Beta-glucanase (putative lichenase) (3.2.1.73)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |