Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulon of Cobalamin in Deinococcus deserti VCD115

Properties
Regulator type: RNA regulatory element
Name: Cobalamin
RFAM: RF00174
Regulation mode:
Biological process: Cobalamin biosynthesis
Effector: Adenosylcobalamin
Regulog: Cobalamin - Deinococcus-Thermus
Under regulation:
- Genes 20
- Operons 2
Member of regulog collections
Regulated operons
Locus Tag Name Function
Position: -242
Score: 41.2
Sequence: GGAAGTCCGGTGAGA...
Locus tag: Deide_2p01550
Name: btuF
Funciton: Vitamin B12 ABC transporter, B12-binding component BtuF
Locus tag: Deide_2p01560
Name: btuR
Funciton: Cob(I)alamin adenosyltransferase (EC 2.5.1.17)
Locus tag: Deide_2p01570
Name: cbiE
Funciton: Cobalt-precorrin-6y C5-methyltransferase (EC 2.1.1.-)
Locus tag: Deide_2p01580
Name: cbiXC
Funciton: Sirohydrochlorin cobaltochelatase (EC 4.99.1.3) / Cobalt-precorrin-8x methylmutase (EC 5.4.1.2)
Locus tag: Deide_2p01590
Name: cbiD
Funciton: Cobalt-precorrin-6 synthase, anaerobic
Locus tag: Deide_2p01600
Name: cbiL
Funciton: Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130)
Locus tag: Deide_2p01610
Name: cbiF
Funciton: Cobalt-precorrin-4 C11-methyltransferase (EC 2.1.1.133)
Locus tag: Deide_2p01620
Name: cbiG
Funciton: Cobalamin biosynthesis protein CbiG
Locus tag: Deide_2p01630
Name: cbiHJ
Funciton: Cobalt-precorrin-3b C17-methyltransferase / Cobalt-precorrin-6x reductase (EC 1.3.1.54)
Locus tag: Deide_2p01640
Name: cobW
Funciton: Cobalamin synthesis protein
Locus tag: Deide_2p01650
Name: hoxN
Funciton: HoxN/HupN/NixA family cobalt transporter
Locus tag: Deide_2p01660
Name: bluB
Funciton: Cob(II)yrinic acid a,c-diamide reductase
Locus tag: Deide_2p01670
Name: cobN
Funciton: Cobaltochelatase, CobN subunit
Locus tag: Deide_2p01680
Name: chlID
Funciton: Cobalt chelatase, ChlI subunit / Cobalt chelatase, ChlD subunit
Locus tag: Deide_2p01690
Name: cbiA
Funciton: Cobyrinic acid a,c-diamide synthase
Locus tag: Deide_2p01700
Name: cbiB
Funciton: Adenosylcobinamide-phosphate synthase (EC 6.3.1.10)
Deide_2p01550
btuF
Vitamin B12 ABC transporter, B12-binding component BtuF
Deide_2p01560
btuR
Cob(I)alamin adenosyltransferase (EC 2.5.1.17)
Deide_2p01570
cbiE
Cobalt-precorrin-6y C5-methyltransferase (EC 2.1.1.-)
Deide_2p01580
cbiXC
Sirohydrochlorin cobaltochelatase (EC 4.99.1.3) / Cobalt-precorrin-8x methylmutase (EC 5.4.1.2)
Deide_2p01590
cbiD
Cobalt-precorrin-6 synthase, anaerobic
Deide_2p01600
cbiL
Cobalt-precorrin-2 C20-methyltransferase (EC 2.1.1.130)
Deide_2p01610
cbiF
Cobalt-precorrin-4 C11-methyltransferase (EC 2.1.1.133)
Deide_2p01620
cbiG
Cobalamin biosynthesis protein CbiG
Deide_2p01630
cbiHJ
Cobalt-precorrin-3b C17-methyltransferase / Cobalt-precorrin-6x reductase (EC 1.3.1.54)
Deide_2p01640
cobW
Cobalamin synthesis protein
Deide_2p01650
hoxN
HoxN/HupN/NixA family cobalt transporter
Deide_2p01660
bluB
Cob(II)yrinic acid a,c-diamide reductase
Deide_2p01670
cobN
Cobaltochelatase, CobN subunit
Deide_2p01680
chlID
Cobalt chelatase, ChlI subunit / Cobalt chelatase, ChlD subunit
Deide_2p01690
cbiA
Cobyrinic acid a,c-diamide synthase
Deide_2p01700
cbiB
Adenosylcobinamide-phosphate synthase (EC 6.3.1.10)
Position: -274
Score: 25.5
Sequence: GGAAGCAGGTGAAGA...
Locus tag: Deide_02140
Name: btuF
Funciton: Vitamin B12 ABC transporter, B12-binding component BtuF
Locus tag: Deide_02150
Name: btuC
Funciton: Vitamin B12 ABC transporter, permease component
Locus tag: Deide_02160
Name: btuD
Funciton: Vitamin B12 ABC transporter, ATP-binding component
Locus tag: Deide_02170
Name: COG3411
Funciton: Thioredoxin domain protein
Deide_02140
btuF
Vitamin B12 ABC transporter, B12-binding component BtuF
Deide_02150
btuC
Vitamin B12 ABC transporter, permease component
Deide_02160
btuD
Vitamin B12 ABC transporter, ATP-binding component
Deide_02170
COG3411
Thioredoxin domain protein
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