Regulons of Marinobacter aqueolei
|
Allows to visualize regulome content in the context of metabolic pathways |
|
| Type |
Regulator |
Effector |
Pathway |
Operons |
Sites |
| TF |
BirA |
Biotin |
Biotin biosynthesis |
3 |
4 |
| TF |
CadR-PbrR |
Lead ion, (Pb2+); Cadmium, ion (Cd2+) |
Lead resistance; Cadmium resistance |
7 |
7 |
| TF |
FabR |
Unsaturated acyl-ACP; Unsaturated acyl-CoA |
Fatty acid biosynthesis |
5 |
5 |
| TF |
FabR2 |
Unsaturated acyl-CoA; Unsaturated acyl-ACP |
Fatty acid biosynthesis |
3 |
2 |
| TF |
GlcC |
Glycolate |
Glycolate utilization |
2 |
4 |
| TF |
HexR2 |
2-keto-3-deoxy-6-phosphogluconate |
Central carbohydrate metabolism |
4 |
4 |
| TF |
IscR |
Iron-sulfur cluster redox state |
Iron-sulfur cluster biogenesis |
5 |
4 |
| TF |
LexA |
DNA damage |
SOS response |
13 |
9 |
| TF |
LiuR |
|
Branched-chain amino acid degradation |
7 |
6 |
| TF |
LldR |
L-lactate |
Lactate utilization |
3 |
4 |
| TF |
MerR |
Mercury ion, (Hg2+) |
Mercury resistance |
3 |
3 |
| TF |
MetR |
Homocysteine |
Methionine biosynthesis |
2 |
4 |
| TF |
NrdR |
Deoxyribonucleotides |
Deoxyribonucleotide biosynthesis |
2 |
5 |
| TF |
NtrC |
Phosphorylated NtrB, signal histidine kinase |
Nitrogen assimilation |
4 |
7 |
| TF |
PdxW |
Pyridoxal-5-phosphate |
Pyridoxine/pyridoxal homeostasis |
1 |
1 |
| TF |
PhnF |
|
Phosphonate utilization |
5 |
4 |
| TF |
PrpR |
2-methylcitrate |
Methylcitrate utilization |
3 |
3 |
| TF |
PsrA |
Oleate |
Fatty acid degradation |
13 |
11 |
| TF |
SahR |
S-adenosylhomocysteine |
Methionine metabolism |
3 |
2 |
| TF |
YjiR2 |
|
Metabolite transport |
1 |
1 |
| TF |
Zur |
Zinc ion, (Zn2+) |
Zinc homeostasis |
4 |
2 |
| RNA |
TPP |
Thiamine pyrophosphate |
Thiamine biosynthesis |
4 |
2 |
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