Regulon of PsrA in Marinobacter aqueolei
| Regulator type: | Transcription factor |
| TF locus tag: | Maqu_1938 |
| Regulator family: | TetR |
| Regulation mode: | repressor |
| Biological process: | Fatty acid degradation |
| Effector: | Oleate |
| Regulog: | PsrA - Oceanospirillales/Alteromonadales |
| Statistics of regulated genes: | |
| - Genes | 10 |
| - Operons | 8 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Oceanospirillales/Alteromonadales
- By trascription factor - PsrA
- By TF family - TetR
- By effector - Oleate
- By pathway - Fatty acid degradation
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -91
Score: 5.4 Sequence: ATTCAAACGCCCGTATGAAG
Locus tag: Maqu_0515
Name: null Funciton: Acyl-CoA dehydrogenase (EC 1.3.99.3) |
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Acyl-CoA dehydrogenase (EC 1.3.99.3)
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Position: -172
Score: 5.4 Sequence: AATCAAACAAACGTTTGTTT
Position: -168
Score: 5.7 Sequence: AAACAAACGTTTGTTTGAAA
Locus tag: Maqu_1471
Name: etfB Funciton: Electron transfer flavoprotein, beta subunit
Locus tag: Maqu_1470
Name: etfA Funciton: Electron transfer flavoprotein, alpha subunit |
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etfB
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Electron transfer flavoprotein, beta subunit
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etfA
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Electron transfer flavoprotein, alpha subunit
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Position: -31
Score: 5.5 Sequence: ATTCATACATTCGTTTGAAC
Locus tag: Maqu_1467
Name: null Funciton: putative saccharopine dehydrogenase |
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putative saccharopine dehydrogenase
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Position: -115
Score: 5.8 Sequence: TTTCAAACGAGTGTTTAATT
Locus tag: Maqu_2750
Name: acdH1 Funciton: Acyl-CoA dehydrogenase (EC 1.3.99.3) |
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acdH1
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Acyl-CoA dehydrogenase (EC 1.3.99.3)
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Position: -132
Score: 5.9 Sequence: ATTCAAACGACTGTATGAAT
Locus tag: Maqu_1144
Name: fadB Funciton: Enoyl-CoA hydratase (EC 4.2.1.17) / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3)
Locus tag: Maqu_1145
Name: fadA Funciton: 3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9) |
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fadB
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Enoyl-CoA hydratase (EC 4.2.1.17) / Delta(3)-cis-delta(2)-trans-enoyl-CoA isomerase (EC 5.3.3.8) / 3-hydroxyacyl-CoA dehydrogenase (EC 1.1.1.35) / 3-hydroxybutyryl-CoA epimerase (EC 5.1.2.3)
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fadA
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3-ketoacyl-CoA thiolase (EC 2.3.1.16) @ Acetyl-CoA acetyltransferase (EC 2.3.1.9)
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Position: -50
Score: 5.4 Sequence: CTTCAAACGTATGTTTCAAA
Position: -37
Score: 5.3 Sequence: TTTCAAACAGACGTTTGCTA
Locus tag: Maqu_1938
Name: psrA Funciton: Predicted transcriptional regulator for fatty acid degradation PsrA, TetR family |
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psrA
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Predicted transcriptional regulator for fatty acid degradation PsrA, TetR family
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Position: -170
Score: 5.6 Sequence: TTTCAAACAAACGTTTGTTT
Position: -166
Score: 5.6 Sequence: AAACAAACGTTTGTTTGATT
Locus tag: Maqu_1472
Name: etfD Funciton: Electron transfer flavoprotein-ubiquinone oxidoreductase (EC 1.5.5.1) |
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etfD
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Electron transfer flavoprotein-ubiquinone oxidoreductase (EC 1.5.5.1)
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Position: -158
Score: 5 Sequence: ATTAAAACAAGCGTTCGATC
Locus tag: Maqu_1531
Name: scp Funciton: Sterol-binding domain protein |
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scp
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Sterol-binding domain protein
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |