Regulons of Bifidobacterium gallicum DSM 20093

Allows to visualize regulome content in the context of metabolic pathways



Type	Regulator	Effector	Pathway	Operons	Sites
TF	AraQ		Central carbohydrate metabolism; Arabinose utilization; Arabinose oligosaccharide utilization	14	3
TF	ArgR	Arginine	Arginine biosynthesis	3	3
TF	BLA_0357		Galactooligosaccharide utilization	1	1
TF	Crp		Tricarboxylic acid cycle; Energy metabolism	9	3
TF	CscR	Sucrose	Sucrose utilization	1	3
TF	FruR		Fructose utilization	2	1
TF	GalR		Galactose utilization	2	1
TF	HrcA	Heat shock	Heat shock response	3	4
TF	LexA	DNA damage	SOS response	11	8
TF	LtbR		Leucine biosynthesis	2	2
TF	MalR1/MalR2/MalR3	Maltose	Maltose utilization; Maltodextrin utilization	14	12
TF	NanR	Sialic acid	Sialic acid utilization	2	2
TF	NrdR	Deoxyribonucleotides	Deoxyribonucleotide biosynthesis	1	2
TF	PtsR		Carbohydrate metabolism	3	2
TF	RbsR3	Ribose	Ribonucleoside utilization	5	4
TF	XosR		Xylooligosacharides utilization	4	2
TF	XylR	Xylose	Xylose utilization	3	4
TF	Zur	Zinc ion, (Zn2+)	Zinc homeostasis	4	2
RNA	FMN	Flavin mononucleotide	Riboflavin biosynthesis	1	1
RNA	TPP	Thiamine pyrophosphate	Thiamine biosynthesis	6	3

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Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --