Regulon of XylR in Bifidobacterium gallicum DSM 20093
| Regulator type: | Transcription factor |
| TF locus tag: | BIFGAL_00988 |
| Regulator family: | ROK |
| Regulation mode: | |
| Biological process: | Xylose utilization |
| Effector: | Xylose |
| Regulog: | XylR - Bifidobacteriaceae |
| Statistics of regulated genes: | |
| - Genes | 3 |
| - Operons | 3 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Bifidobacteriaceae
- By TF family - ROK
- By effector - Xylose
- By pathway - Xylose utilization
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -339
Score: 5.9 Sequence: TATAATTAAATCATTAAACTATT
Locus tag: BIFGAL_00986
Name: xylB Funciton: Xylulose kinase (EC 2.7.1.17) |
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xylB
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Xylulose kinase (EC 2.7.1.17)
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Position: -293
Score: 5.9 Sequence: AATAGTTTAATGATTTAATTATA
Locus tag: BIFGAL_00988
Name: xylR Funciton: Xylose repressor XylR, ROK family |
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xylR
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Xylose repressor XylR, ROK family
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Position: -164
Score: 5.1 Sequence: TATAATTCAATGATTTGACAAAT
Position: -142
Score: 5.1 Sequence: TATAGTTTAACGGTTTTACCATG
Locus tag: BIFGAL_00965
Name: xylA Funciton: Xylose isomerase (EC 5.3.1.5) |
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xylA
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Xylose isomerase (EC 5.3.1.5)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |