Profile of regulator XylR in Bifidobacteriaceae

Member of regulog collections

Transcription factor binding sites

	Locus Tag	Name	Position	Score	Sequence
Bifidobacterium longum subsp. infantis ATCC 15697
	Blon_0572	xylB	-76	5.5	TATAGTTTAATCGTCTAACTTAT
	Blon_0573	xylR	-166	5.5	ATAAGTTAGACGATTAAACTATA
Bifidobacterium adolescentis ATCC 15703
	BAD_0433	xylR	-121	5.9	AATAGTTAGATGAATAAACTATA
	BAD_0422	xylA	-117	5	TATAGTTTAACGAATTGACAAAC
	BAD_0422	xylA	-95	4.9	CTTAGGTAATTCAATTTATTATG
	BAD_0432	xylB	-71	5.9	TATAGTTTATTCATCTAACTATT
Bifidobacterium angulatum DSM 20098
	BIFANG_00026	xylB	-71	5.8	TATAGTTTATTCGTCTAACTATT
	BIFANG_00036	xylA	-96	4.9	CTTAGGTAATTCATTTTATTATC
	BIFANG_00036	xylA	-118	4.9	TATAGTTCAACGAATTGACAAAC
	BIFANG_00025	xylR	-119	5.8	AATAGTTAGACGAATAAACTATA
Bifidobacterium animalis subsp. lactis AD011
	BLA_1052	xylB	-121	5.6	ATTAGTTTAATGAACATACTATA
	BLA_0485	xylA	-122	5.1	TATAGTATTTTCGTTTTACTATA
	BLA_1053	xylR	-88	5.6	TATAGTATGTTCATTAAACTAAT
Bifidobacterium dentium Bd1
	BDP_0576	xylR	-100	5.7	ATTAGTTAGATGAATGAACTATA
	BDP_0561	xylA	-97	4.9	CTTAGGTAGATGAATTTATTATG
	BDP_0575	xylB	-78	5.7	TATAGTTCATTCATCTAACTAAT
Bifidobacterium gallicum DSM 20093
	BIFGAL_00986	xylB	-339	5.9	TATAATTAAATCATTAAACTATT
	BIFGAL_00988	xylR	-293	5.9	AATAGTTTAATGATTTAATTATA
	BIFGAL_00965	xylA	-164	5.1	TATAATTCAATGATTTGACAAAT
	BIFGAL_00965	xylA	-142	5.1	TATAGTTTAACGGTTTTACCATG
Bifidobacterium longum NCC2705
	BL1709	xylB	-75	5.5	TATAGTTTAATCGTCTAACTTAT
	BL1704	xylA	-67	5	CTTAGTTCGTTCGTTTTATTATT
	BL1704	xylA	-89	4.8	ATTAATTCAATCATTTGACAAAC
	BL1710	xylR	-167	5.5	ATAAGTTAGACGATTAAACTATA

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	Regulatory Sites	[ FASTA format ]	DOWNLOAD

Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --