Profile of regulator XylR in Bifidobacteriaceae
Properties
| Regulator family: |
ROK |
| Regulation mode: |
|
| Biological process: |
Xylose utilization |
| Effector: |
Xylose |
| Regulog: |
XylR - Bifidobacteriaceae |
Member of regulog collections
Transcription factor binding sites
|
Locus Tag |
Name |
Position |
Score |
Sequence |
|
Bifidobacterium longum subsp. infantis ATCC 15697
|
|
Blon_0572 |
xylB |
-76 |
5.5 |
TATAGTTTAATCGTCTAACTTAT |
|
Blon_0573 |
xylR |
-166 |
5.5 |
ATAAGTTAGACGATTAAACTATA |
|
Bifidobacterium adolescentis ATCC 15703
|
|
BAD_0433 |
xylR |
-121 |
5.9 |
AATAGTTAGATGAATAAACTATA |
|
BAD_0422 |
xylA |
-117 |
5 |
TATAGTTTAACGAATTGACAAAC |
|
BAD_0422 |
xylA |
-95 |
4.9 |
CTTAGGTAATTCAATTTATTATG |
|
BAD_0432 |
xylB |
-71 |
5.9 |
TATAGTTTATTCATCTAACTATT |
|
Bifidobacterium angulatum DSM 20098
|
|
BIFANG_00026 |
xylB |
-71 |
5.8 |
TATAGTTTATTCGTCTAACTATT |
|
BIFANG_00036 |
xylA |
-96 |
4.9 |
CTTAGGTAATTCATTTTATTATC |
|
BIFANG_00036 |
xylA |
-118 |
4.9 |
TATAGTTCAACGAATTGACAAAC |
|
BIFANG_00025 |
xylR |
-119 |
5.8 |
AATAGTTAGACGAATAAACTATA |
|
Bifidobacterium animalis subsp. lactis AD011
|
|
BLA_1052 |
xylB |
-121 |
5.6 |
ATTAGTTTAATGAACATACTATA |
|
BLA_0485 |
xylA |
-122 |
5.1 |
TATAGTATTTTCGTTTTACTATA |
|
BLA_1053 |
xylR |
-88 |
5.6 |
TATAGTATGTTCATTAAACTAAT |
|
Bifidobacterium dentium Bd1
|
|
BDP_0576 |
xylR |
-100 |
5.7 |
ATTAGTTAGATGAATGAACTATA |
|
BDP_0561 |
xylA |
-97 |
4.9 |
CTTAGGTAGATGAATTTATTATG |
|
BDP_0575 |
xylB |
-78 |
5.7 |
TATAGTTCATTCATCTAACTAAT |
|
Bifidobacterium gallicum DSM 20093
|
|
BIFGAL_00986 |
xylB |
-339 |
5.9 |
TATAATTAAATCATTAAACTATT |
|
BIFGAL_00988 |
xylR |
-293 |
5.9 |
AATAGTTTAATGATTTAATTATA |
|
BIFGAL_00965 |
xylA |
-164 |
5.1 |
TATAATTCAATGATTTGACAAAT |
|
BIFGAL_00965 |
xylA |
-142 |
5.1 |
TATAGTTTAACGGTTTTACCATG |
|
Bifidobacterium longum NCC2705
|
|
BL1709 |
xylB |
-75 |
5.5 |
TATAGTTTAATCGTCTAACTTAT |
|
BL1704 |
xylA |
-67 |
5 |
CTTAGTTCGTTCGTTTTATTATT |
|
BL1704 |
xylA |
-89 |
4.8 |
ATTAATTCAATCATTTGACAAAC |
|
BL1710 |
xylR |
-167 |
5.5 |
ATAAGTTAGACGATTAAACTATA |
Export
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Regulatory Sites
|
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