Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Profile of regulator XylR in Bifidobacteriaceae

Properties
Regulator family: ROK
Regulation mode:
Biological process: Xylose utilization
Effector: Xylose
Regulog: XylR - Bifidobacteriaceae
Member of regulog collections
Transcription factor binding sites
Locus Tag Name Position Score Sequence
Bifidobacterium longum subsp. infantis ATCC 15697
Blon_0572 xylB -76 5.5 TATAGTTTAATCGTCTAACTTAT
Blon_0573 xylR -166 5.5 ATAAGTTAGACGATTAAACTATA
Bifidobacterium adolescentis ATCC 15703
BAD_0433 xylR -121 5.9 AATAGTTAGATGAATAAACTATA
BAD_0422 xylA -117 5 TATAGTTTAACGAATTGACAAAC
BAD_0422 xylA -95 4.9 CTTAGGTAATTCAATTTATTATG
BAD_0432 xylB -71 5.9 TATAGTTTATTCATCTAACTATT
Bifidobacterium angulatum DSM 20098
BIFANG_00026 xylB -71 5.8 TATAGTTTATTCGTCTAACTATT
BIFANG_00036 xylA -96 4.9 CTTAGGTAATTCATTTTATTATC
BIFANG_00036 xylA -118 4.9 TATAGTTCAACGAATTGACAAAC
BIFANG_00025 xylR -119 5.8 AATAGTTAGACGAATAAACTATA
Bifidobacterium animalis subsp. lactis AD011
BLA_1052 xylB -121 5.6 ATTAGTTTAATGAACATACTATA
BLA_0485 xylA -122 5.1 TATAGTATTTTCGTTTTACTATA
BLA_1053 xylR -88 5.6 TATAGTATGTTCATTAAACTAAT
Bifidobacterium dentium Bd1
BDP_0576 xylR -100 5.7 ATTAGTTAGATGAATGAACTATA
BDP_0561 xylA -97 4.9 CTTAGGTAGATGAATTTATTATG
BDP_0575 xylB -78 5.7 TATAGTTCATTCATCTAACTAAT
Bifidobacterium gallicum DSM 20093
BIFGAL_00986 xylB -339 5.9 TATAATTAAATCATTAAACTATT
BIFGAL_00988 xylR -293 5.9 AATAGTTTAATGATTTAATTATA
BIFGAL_00965 xylA -164 5.1 TATAATTCAATGATTTGACAAAT
BIFGAL_00965 xylA -142 5.1 TATAGTTTAACGGTTTTACCATG
Bifidobacterium longum NCC2705
BL1709 xylB -75 5.5 TATAGTTTAATCGTCTAACTTAT
BL1704 xylA -67 5 CTTAGTTCGTTCGTTTTATTATT
BL1704 xylA -89 4.8 ATTAATTCAATCATTTGACAAAC
BL1710 xylR -167 5.5 ATAAGTTAGACGATTAAACTATA
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Regulatory Sites [ FASTA format ] DOWNLOAD