Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes
-- version 3.2 --

Regulons of Clostridium sp. OhILAs

Allows to visualize regulome content in the context of metabolic pathways
Type Regulator Effector Pathway Operons Sites
RNA Cobalamin Adenosylcobalamin Cobalamin biosynthesis 11 8
RNA FMN Flavin mononucleotide Riboflavin biosynthesis 1 1
RNA GEMM_RNA_motif Cyclic diguanylate Second messenger response 4 1
RNA Glycine Glycine Glycine metabolism 2 4
RNA L10_leader Ribosome biogenesis 1 1
RNA L19_leader Ribosome biogenesis 1 1
RNA L20_leader Ribosome biogenesis 1 1
RNA L21_leader Ribosome biogenesis 1 1
RNA Lysine Lysine Lysine biosynthesis 3 2
RNA MOCO_RNA_motif Molybdenum Molybdopterin biosynthesis; Molybdenum homeostasis 8 1
RNA PreQ1 Pre-queuosine1 Queuosine biosynthesis 1 1
RNA Purine Adenine; Guanine Purine metabolism 4 2
RNA PyrR PyrR Pyrimidine metabolism 7 4
RNA SAM S-adenosylmethionine Methionine biosynthesis 6 5
RNA T-box(Ala) Ala-tRNA Amino acid metabolism 1 1
RNA T-box(Arg) Arg-tRNA Amino acid metabolism 2 1
RNA T-box(Asn) Asn-tRNA Amino acid metabolism 2 1
RNA T-box(Asp) Asp-tRNA Amino acid metabolism 1 1
RNA T-box(Cys) Cys-tRNA Amino acid metabolism 3 1
RNA T-box(Gly) Gly-tRNA Amino acid metabolism 1 1
RNA T-box(His) His-tRNA Amino acid metabolism 1 1
RNA T-box(Leu) Leu-tRNA Amino acid metabolism 1 1
RNA T-box(Met) Met-tRNA Amino acid metabolism 4 4
RNA T-box(Phe) Phe-tRNA Amino acid metabolism 1 1
RNA T-box(Pro) Pro-tRNA Amino acid metabolism 1 1
RNA T-box(Ser) Ser-tRNA Amino acid metabolism 1 1
RNA T-box(Thr) Thr-tRNA Amino acid metabolism 2 2
RNA T-box(Trp) Trp-tRNA Amino acid metabolism 3 3
RNA T-box(Tyr) Tyr-tRNA Amino acid metabolism 1 1
RNA T-box(Val) Val-tRNA Amino acid metabolism 2 1
RNA THF Tetrahydrofolate Folate metabolism 1 1
RNA TPP Thiamine pyrophosphate Thiamine biosynthesis 3 3
RNA glmS Glucosamine-6-phosphate Amino sugar metabolism 1 1
RNA ydaO-yuaA Cell wall metabolism; Osmotic stress response 3 1
RNA ykkC-yxkD Multidrug resistance 2 2
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