Regulon of TPP in Clostridium sp. OhILAs
| Regulator type: | RNA regulatory element |
| Name: | TPP |
| RFAM: | RF00059 |
| Regulation mode: | |
| Biological process: | Thiamine biosynthesis |
| Effector: | Thiamine pyrophosphate |
| Regulog: | TPP - Clostridiaceae |
| Under regulation: | |
| - Genes | 6 |
| - Operons | 3 |
Member of regulog collections
- By taxonomy - Clostridiaceae
- By RNA motif - TPP
- By effector - Thiamine pyrophosphate
- By pathway - Thiamine biosynthesis
| Locus Tag | Name | Function | |
|---|---|---|---|
|
Position: -258
Score: 71.8 Sequence: TAAGTTAGAAGGGGA...
Locus tag: Clos_0766
Name: thiC Funciton: Thiamine biosynthesis protein ThiC
Locus tag: Clos_0767
Name: thiW Funciton: Substrate-specific component ThiW of predicted thiazole ECF transporter |
|||
|
thiC
|
Thiamine biosynthesis protein ThiC
|
||
|
thiW
|
Substrate-specific component ThiW of predicted thiazole ECF transporter
|
||
|
Position: -182
Score: 61.7 Sequence: TATTTATCGCTAGGG...
Locus tag: Clos_0240
Name: thiT Funciton: Substrate-specific component ThiT of thiamin ECF transporter |
|||
|
thiT
|
Substrate-specific component ThiT of thiamin ECF transporter
|
||
|
Position: -426
Score: 68.4 Sequence: AATGGAACACTGGGA...
Locus tag: Clos_2695
Name: thiD Funciton: Phosphomethylpyrimidine kinase (EC 2.7.4.7)
Locus tag: Clos_2694
Name: thiM Funciton: Hydroxyethylthiazole kinase (EC 2.7.1.50)
Locus tag: Clos_2693
Name: thiE Funciton: Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3) |
|||
|
thiD
|
Phosphomethylpyrimidine kinase (EC 2.7.4.7)
|
||
|
thiM
|
Hydroxyethylthiazole kinase (EC 2.7.1.50)
|
||
|
thiE
|
Thiamin-phosphate pyrophosphorylase (EC 2.5.1.3)
|
||
|
Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |