Regulons of Mycobacterium vanbaalenii PYR-1

Allows to visualize regulome content in the context of metabolic pathways



Type	Regulator	Effector	Pathway	Operons	Sites
TF	AcnR	Citrate	Tricarboxylic acid cycle	2	2
TF	ArgR	Arginine	Arginine biosynthesis	1	1
TF	ArsR	Arsenite; Arsenate	Arsenic resistance	1	1
TF	BioQ	Biotin	Biotin biosynthesis	5	3
TF	BioQ	Biotin	Biotin biosynthesis	3	3
TF	DosR	Oxygen; Carbon monoxide; Nitric oxide	Dormancy	35	31
TF	EutR	Ethanolamine	Ethanolamine utilization	2	2
TF	HrcA	Heat shock	Heat shock response	4	5
TF	HspR	Heat shock	Heat shock response	4	5
TF	IolR		Inositol utilization	4	5
TF	LexA	DNA damage	SOS response	7	9
TF	LtbR		Leucine biosynthesis	2	4
TF	MSMEG_4140		Metabolite transport	1	1
TF	Mce2R		Fatty acid metabolism	1	1
TF	MntR	Manganese ion, (Mn2+)	Manganese homeostasis	2	2
TF	NrdR	Deoxyribonucleotides	Deoxyribonucleotide biosynthesis	2	5
TF	NrtR	Adenosine diphosphate ribose	NAD biosynthesis	2	2
TF	PdxR3		Pyridoxine/pyridoxal homeostasis	1	1
TF	PhnF		Phosphonate utilization; 2-aminoethylphosphonate utilization	4	5
TF	SutR	Sulfate	Sulfur metabolism	1	1
TF	Znr	Zinc ion, (Zn2+)	Zinc homeostasis	2	2
TF	Zur	Zinc ion, (Zn2+)	Zinc homeostasis	11	13
RNA	Cobalamin	Adenosylcobalamin	Cobalamin biosynthesis	2	1
RNA	Glycine	Glycine	Glycine metabolism	2	2
RNA	PyrR	PyrR	Pyrimidine metabolism	1	1
RNA	SAM-IV	S-adenosylmethionine	Sulfur metabolism	3	2
RNA	T-box(Ile)	Ile-tRNA	Amino acid metabolism	1	1
RNA	TPP	Thiamine pyrophosphate	Thiamine biosynthesis	2	2
RNA	ydaO-yuaA		Osmotic stress response; Cell wall metabolism	1	1
RNA	ykkC-yxkD		Multidrug resistance	1	1
RNA	yybP-ykoY			4	4

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Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --