Regulon of LexA in Mycobacterium vanbaalenii PYR-1
| Regulator type: | Transcription factor |
| TF locus tag: | Mvan_2441 |
| Regulator family: | LexA |
| Regulation mode: | repressor |
| Biological process: | SOS response |
| Effector: | DNA damage |
| Regulog: | LexA - Mycobacteriaceae |
| Statistics of regulated genes: | |
| - Genes | 11 |
| - Operons | 7 |
| Visualization: | |
|
Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By trascription factor - LexA
- By taxonomy - Mycobacteriaceae
- By TF family - LexA
- By effector - DNA damage
- By pathway - SOS response
| Locus Tag | Name | Function | |
|---|---|---|---|
|
Position: -28
Score: 5.6 Sequence: TCGAACGCTTGTTCGA
Locus tag: Mvan_1530
Name: dnaE2 Funciton: DNA polymerase III alpha subunit (EC 2.7.7.7) |
|||
|
dnaE2
|
DNA polymerase III alpha subunit (EC 2.7.7.7)
|
||
|
Position: -52
Score: 4.7 Sequence: TCGAACAAAGTTTCGA
Locus tag: Mvan_1522
Name: Rv3395c Funciton: Recombinase-like hypothetical protein
Locus tag: Mvan_1523
Name: COG0389 Funciton: DNA polymerase-like protein PA0670 |
|||
|
Rv3395c
|
Recombinase-like hypothetical protein
|
||
|
COG0389
|
DNA polymerase-like protein PA0670
|
||
|
Position: -23
Score: 5.1 Sequence: TCGAACGTATGTTCGC
Locus tag: Mvan_2599
Name: splB Funciton: DNA repair photolyase |
|||
|
splB
|
DNA repair photolyase
|
||
|
Position: -121
Score: 5.2 Sequence: TCGAACACCTGTTCGT
Locus tag: Mvan_2420
Name: recA Funciton: Recombinase A
Locus tag: Mvan_2421
Name: recX Funciton: Regulatory protein RecX |
|||
|
recA
|
Recombinase A
|
||
|
recX
|
Regulatory protein RecX
|
||
|
Position: -29
Score: 5.3 Sequence: TCGAACGCCTGTGCGA
Locus tag: Mvan_4812
Name: alkB Funciton: DNA repair system specific for alkylated DNA |
|||
|
alkB
|
DNA repair system specific for alkylated DNA
|
||
|
Position: -183
Score: 5.4 Sequence: TCGATCAGGTGTTCGA
Position: -163
Score: 5 Sequence: TAGAACACGTGATCGA
Position: -48
Score: 5.6 Sequence: TCGAACACATGTTTGA
Locus tag: Mvan_2441
Name: lexA Funciton: SOS-response repressor and protease LexA (EC 3.4.21.88) |
|||
|
lexA
|
SOS-response repressor and protease LexA (EC 3.4.21.88)
|
||
|
Position: -34
Score: 5.1 Sequence: TCGAACAGATGTTCTG
Locus tag: Mvan_2573
Name: ruvC Funciton: Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)
Locus tag: Mvan_2574
Name: ruvA Funciton: Holliday junction DNA helicase RuvA
Locus tag: Mvan_2575
Name: ruvB Funciton: Holliday junction DNA helicase RuvB |
|||
|
ruvC
|
Crossover junction endodeoxyribonuclease RuvC (EC 3.1.22.4)
|
||
|
ruvA
|
Holliday junction DNA helicase RuvA
|
||
|
ruvB
|
Holliday junction DNA helicase RuvB
|
||
|
Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
|
Regulatory Sites | [ FASTA format ] | DOWNLOAD |