Regulons of Geobacter metallireducens GS-15

Allows to visualize regulome content in the context of metabolic pathways



Type	Regulator	Effector	Pathway	Operons	Sites
TF	BirA	Biotin	Biotin biosynthesis	2	2
TF	Fur	Iron ion, (Fe2+)	Iron homeostasis	4	5
TF	HcpR	Nitric oxide	Nitrosative stress response	9	7
TF	HrcA	Heat shock	Heat shock response	3	3
TF	IscR	Iron-sulfur cluster redox state	Iron-sulfur cluster biogenesis	2	2
TF	LexA	DNA damage	SOS response	1	1
TF	NikR	Nickel ion, (Ni2+)	Nickel homeostasis	1	1
TF	NrdR	Deoxyribonucleotides	Deoxyribonucleotide biosynthesis	2	1
TF	NtrC	Phosphorylated NtrB, signal histidine kinase	Nitrogen assimilation	5	5
TF	PrpR	2-methylcitrate	Methylcitrate utilization	1	2
TF	SdhR2		Tricarboxylic acid cycle	12	9
RNA	MOCO_RNA_motif	Molybdenum	Molybdopterin biosynthesis; Tungsten homeostasis; Molybdenum homeostasis	4	3
RNA	TPP	Thiamine pyrophosphate	Thiamine biosynthesis	3	2

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Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --