Regulon of HcpR in Geobacter metallireducens GS-15
| Regulator type: | Transcription factor |
| TF locus tag: | Gmet_0092 |
| Regulator family: | CRP |
| Regulation mode: | activator |
| Biological process: | Nitrosative stress response |
| Effector: | Nitric oxide |
| Regulog: | HcpR - Desulfuromonadales |
| Statistics of regulated genes: | |
| - Genes | 10 |
| - Operons | 7 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Desulfuromonadales
- By trascription factor - HcpR
- By TF family - CRP
- By effector - Nitric oxide
- By pathway - Nitrosative stress response
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -150
Score: 5.5 Sequence: TCTTGACCAAGGTCAAAG
Locus tag: Gmet_2834
Name: hcp Funciton: Hydroxylamine reductase (EC 1.7.-.-) |
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hcp
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Hydroxylamine reductase (EC 1.7.-.-)
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Position: -73
Score: 4.6 Sequence: TTTTGATTCACATCATAA
Locus tag: Gmet_2513
Name: SSF140683 Funciton: SP0561-like superfamily hypothetical protein |
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SSF140683
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SP0561-like superfamily hypothetical protein
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Position: -24
Score: 5.2 Sequence: TTTTGACCGGGGTCAAAC
Locus tag: Gmet_0691
Name: COG1917 Funciton: hypothetical protein |
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COG1917
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hypothetical protein
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Position: -2
Score: 5 Sequence: TTTTGACATTGGTCATGA
Locus tag: Gmet_3184
Name: ygbA Funciton: hypothetical protein involved in nitrosative stress
Locus tag: Gmet_3185
Name: frdX1 Funciton: Ferredoxin fused to uncharacterized domain |
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ygbA
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hypothetical protein involved in nitrosative stress
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frdX1
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Ferredoxin fused to uncharacterized domain
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Position: -81
Score: 5.3 Sequence: TTTTGACCACGGTCAAGG
Locus tag: Gmet_3041
Name: ndh Funciton: NADH dehydrogenase (EC 1.6.99.3)
Locus tag: Gmet_3040
Name: COG2006 Funciton: Iron-sulfur cluster-binding protein |
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ndh
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NADH dehydrogenase (EC 1.6.99.3)
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COG2006
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Iron-sulfur cluster-binding protein
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Position: -112
Score: 5.3 Sequence: CTTTGACATAAGTCAAGG
Locus tag: Gmet_0295
Name: nrfH Funciton: Cytochrome c nitrite reductase, small subunit NrfH
Locus tag: Gmet_0294
Name: nrfA Funciton: Cytochrome c552 precursor (EC 1.7.2.2) |
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nrfH
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Cytochrome c nitrite reductase, small subunit NrfH
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nrfA
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Cytochrome c552 precursor (EC 1.7.2.2)
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Position: -196
Score: 5.3 Sequence: CCTTGACTTATGTCAAAG
Locus tag: Gmet_0296
Name: nrfA Funciton: Cytochrome c552 precursor (EC 1.7.2.2) |
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nrfA
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Cytochrome c552 precursor (EC 1.7.2.2)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |