Regulon of HcpR in Geobacter metallireducens GS-15

Properties
Regulator type:	Transcription factor
TF locus tag:	Gmet_0092
Regulator family:	CRP
Regulation mode:	activator
Biological process:	Nitrosative stress response
Effector:	Nitric oxide
Regulog:	HcpR - Desulfuromonadales
Statistics of regulated genes:
- Genes	10
- Operons	7
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 44 sites [see more]

Member of regulog collections

By taxonomy - Desulfuromonadales
By trascription factor - HcpR
By TF family - CRP
By effector - Nitric oxide
By pathway - Nitrosative stress response

Regulated operons
	Locus Tag	Name	Function
Position: -150 Score: 5.5 Sequence: TCTTGACCAAGGTCAAAG Locus tag: Gmet_2834 Name: hcp Funciton: Hydroxylamine reductase (EC 1.7.-.-)
	Gmet_2834	hcp	Hydroxylamine reductase (EC 1.7.-.-)
Position: -73 Score: 4.6 Sequence: TTTTGATTCACATCATAA Locus tag: Gmet_2513 Name: SSF140683 Funciton: SP0561-like superfamily hypothetical protein
	Gmet_2513	SSF140683	SP0561-like superfamily hypothetical protein
Position: -24 Score: 5.2 Sequence: TTTTGACCGGGGTCAAAC Locus tag: Gmet_0691 Name: COG1917 Funciton: hypothetical protein
	Gmet_0691	COG1917	hypothetical protein
Position: -2 Score: 5 Sequence: TTTTGACATTGGTCATGA Locus tag: Gmet_3184 Name: ygbA Funciton: hypothetical protein involved in nitrosative stress Locus tag: Gmet_3185 Name: frdX1 Funciton: Ferredoxin fused to uncharacterized domain
	Gmet_3184	ygbA	hypothetical protein involved in nitrosative stress
	Gmet_3185	frdX1	Ferredoxin fused to uncharacterized domain
Position: -81 Score: 5.3 Sequence: TTTTGACCACGGTCAAGG Locus tag: Gmet_3041 Name: ndh Funciton: NADH dehydrogenase (EC 1.6.99.3) Locus tag: Gmet_3040 Name: COG2006 Funciton: Iron-sulfur cluster-binding protein
	Gmet_3041	ndh	NADH dehydrogenase (EC 1.6.99.3)
	Gmet_3040	COG2006	Iron-sulfur cluster-binding protein
Position: -112 Score: 5.3 Sequence: CTTTGACATAAGTCAAGG Locus tag: Gmet_0295 Name: nrfH Funciton: Cytochrome c nitrite reductase, small subunit NrfH Locus tag: Gmet_0294 Name: nrfA Funciton: Cytochrome c552 precursor (EC 1.7.2.2)
	Gmet_0295	nrfH	Cytochrome c nitrite reductase, small subunit NrfH
	Gmet_0294	nrfA	Cytochrome c552 precursor (EC 1.7.2.2)
Position: -196 Score: 5.3 Sequence: CCTTGACTTATGTCAAAG Locus tag: Gmet_0296 Name: nrfA Funciton: Cytochrome c552 precursor (EC 1.7.2.2)
	Gmet_0296	nrfA	Cytochrome c552 precursor (EC 1.7.2.2)

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD