Regulons of Magnetospirillum magneticum AMB-1

Allows to visualize regulome content in the context of metabolic pathways



Type	Regulator	Effector	Pathway	Operons	Sites
TF	CueR	Copper ion, (Cu+)	Copper resistance	2	2
TF	FnrN	Oxygen	Oxidative stress response; Nitrogen fixation	4	1
TF	Fur	Iron ion, (Fe2+)	Iron homeostasis	13	11
TF	HrcA	Heat shock	Heat shock response	1	1
TF	Irr	Heme	Iron homeostasis	2	1
TF	IscR	Iron-sulfur cluster redox state	Iron-sulfur cluster biogenesis	1	1
TF	LexA	DNA damage	SOS response	9	6
TF	LldR	L-lactate	Lactate utilization	3	3
TF	MdcY		Malonate metabolism	2	3
TF	ModE	Molybdate	Molybdopterin biosynthesis	3	3
TF	NifA		Nitrogen fixation	10	10
TF	NrdR	Deoxyribonucleotides	Deoxyribonucleotide biosynthesis	1	2
TF	NtrC	Phosphorylated NtrB, signal histidine kinase	Nitrogen assimilation	7	10
TF	PdxW	Pyridoxal-5-phosphate	Pyridoxine/pyridoxal homeostasis	1	1
TF	SahR	S-adenosylhomocysteine	Methionine metabolism	3	2
TF	Zur	Zinc ion, (Zn2+)	Zinc homeostasis	2	2
RNA	TPP	Thiamine pyrophosphate	Thiamine biosynthesis	2	1

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Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --