Regulons of Magnetospirillum magneticum AMB-1
|
Allows to visualize regulome content in the context of metabolic pathways |
|
| Type |
Regulator |
Effector |
Pathway |
Operons |
Sites |
| TF |
CueR |
Copper ion, (Cu+) |
Copper resistance |
2 |
2 |
| TF |
FnrN |
Oxygen |
Oxidative stress response; Nitrogen fixation |
4 |
1 |
| TF |
Fur |
Iron ion, (Fe2+) |
Iron homeostasis |
13 |
11 |
| TF |
HrcA |
Heat shock |
Heat shock response |
1 |
1 |
| TF |
Irr |
Heme |
Iron homeostasis |
2 |
1 |
| TF |
IscR |
Iron-sulfur cluster redox state |
Iron-sulfur cluster biogenesis |
1 |
1 |
| TF |
LexA |
DNA damage |
SOS response |
9 |
6 |
| TF |
LldR |
L-lactate |
Lactate utilization |
3 |
3 |
| TF |
MdcY |
|
Malonate metabolism |
2 |
3 |
| TF |
ModE |
Molybdate |
Molybdopterin biosynthesis |
3 |
3 |
| TF |
NifA |
|
Nitrogen fixation |
10 |
10 |
| TF |
NrdR |
Deoxyribonucleotides |
Deoxyribonucleotide biosynthesis |
1 |
2 |
| TF |
NtrC |
Phosphorylated NtrB, signal histidine kinase |
Nitrogen assimilation |
7 |
10 |
| TF |
PdxW |
Pyridoxal-5-phosphate |
Pyridoxine/pyridoxal homeostasis |
1 |
1 |
| TF |
SahR |
S-adenosylhomocysteine |
Methionine metabolism |
3 |
2 |
| TF |
Zur |
Zinc ion, (Zn2+) |
Zinc homeostasis |
2 |
2 |
| RNA |
TPP |
Thiamine pyrophosphate |
Thiamine biosynthesis |
2 |
1 |
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