Regulons of Ruminococcus lactaris ATCC 29176

Allows to visualize regulome content in the context of metabolic pathways



Type	Regulator	Effector	Pathway	Operons	Sites
TF	ArgR	Arginine	Arginine biosynthesis	4	5
TF	BirA	Biotin	Biotin biosynthesis	2	2
TF	Fur	Iron ion, (Fe2+)	Iron homeostasis	5	9
TF	HisR	Histidine	Histidine biosynthesis	3	3
TF	HrcA	Heat shock	Heat shock response	7	6
TF	IdeR	Iron ion, (Fe2+)	Iron homeostasis	5	4
TF	IscR	Iron-sulfur cluster redox state	Iron-sulfur cluster biogenesis	1	1
TF	LexA	DNA damage	SOS response	5	9
TF	NiaR	Niacin	NAD biosynthesis	2	1
TF	NrdR	Deoxyribonucleotides	Deoxyribonucleotide biosynthesis	3	2
TF	PdxR	Pyridoxal-5-phosphate	Pyridoxine biosynthesis	3	2
TF	Rex	NADH	Energy metabolism	19	8
RNA	FMN	Flavin mononucleotide	Riboflavin biosynthesis	1	1
RNA	TPP	Thiamine pyrophosphate	Thiamine biosynthesis	2	1

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Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --