Regulon of HrcA in Ruminococcus lactaris ATCC 29176

Properties
Regulator type:	Transcription factor
TF locus tag:	RUMLAC_02656
Regulator family:	HrcA
Regulation mode:	repressor
Biological process:	Heat shock response
Effector:	Heat shock
Regulog:	HrcA - Clostridia-3
Statistics of regulated genes:
- Genes	9
- Operons	6
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 81 sites [see more]

Member of regulog collections

By taxonomy - Clostridia-3
By trascription factor - HrcA
By TF family - HrcA
By effector - Heat shock
By pathway - Heat shock response

Regulated operons
	Locus Tag	Name	Function
Position: -95 Score: 7.2 Sequence: TTAGCACTCAACTCTTTACAGTGCTAA Locus tag: RUMLAC_01141 Name: clpB Funciton: ATP-dependent Clp protease ATP-binding subunit ClpB
	RUMLAC_01141	clpB	ATP-dependent Clp protease ATP-binding subunit ClpB
Position: -196 Score: 6.7 Sequence: TTGGCACTCAACACTTTACAGTGCTAA Locus tag: RUMLAC_01519 Name: hsp20 Funciton: Heat shock protein Hsp20
	RUMLAC_01519	hsp20	Heat shock protein Hsp20
Position: -372 Score: 7.2 Sequence: TTAGCACTCAAGTGAAAAGAGTGCTAA Locus tag: RUMLAC_02471 Name: groEL Funciton: Heat shock protein 60 family chaperone GroEL
	RUMLAC_02471	groEL	Heat shock protein 60 family chaperone GroEL
Position: -54 Score: 7.2 Sequence: TTAGCACTCAAGTGAAAAGAGTGCTAA Locus tag: RUMLAC_02470 Name: groES Funciton: Heat shock protein 60 family co-chaperone GroES
	RUMLAC_02470	groES	Heat shock protein 60 family co-chaperone GroES
Position: -96 Score: 7.4 Sequence: TTAGCACTCTATTTAAAAGAGTGCTAA Locus tag: RUMLAC_00300 Name: htpG Funciton: Heat shock chaperone protein 90
	RUMLAC_00300	htpG	Heat shock chaperone protein 90
Position: -68 Score: 7.1 Sequence: TTAGCACTCAAAAGCAGGGAGTGCTAA Locus tag: RUMLAC_02656 Name: hrcA Funciton: heat-inducible transcription repressor HrcA Locus tag: RUMLAC_02655 Name: grpE Funciton: Heat shock protein GrpE Locus tag: RUMLAC_02654 Name: dnaK Funciton: Chaperone protein DnaK Locus tag: RUMLAC_02653 Name: dnaJ Funciton: Chaperone protein DnaJ
	RUMLAC_02656	hrcA	heat-inducible transcription repressor HrcA
	RUMLAC_02655	grpE	Heat shock protein GrpE
	RUMLAC_02654	dnaK	Chaperone protein DnaK
	RUMLAC_02653	dnaJ	Chaperone protein DnaJ

Export
	Regulated Genes	[ Tab delimited format ]	DOWNLOAD
	Regulatory Sites	[ FASTA format ]	DOWNLOAD