Regulon of Rex in Ruminococcus lactaris ATCC 29176
| Regulator type: | Transcription factor |
| TF locus tag: | RUMLAC_02084 |
| Regulator family: | Rex |
| Regulation mode: | repressor |
| Biological process: | Energy metabolism |
| Effector: | NADH |
| Regulog: | Rex - Clostridia-3 |
| Statistics of regulated genes: | |
| - Genes | 9 |
| - Operons | 7 |
| Visualization: | |
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Allows to visualize regulon content in the context of metabolic pathways |
Member of regulog collections
- By taxonomy - Clostridia-3
- By TF family - Rex
- By effector - NADH
- By pathway - Energy metabolism
| Locus Tag | Name | Function | |
|---|---|---|---|
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Position: -157
Score: 5.5 Sequence: ATGTTAAAAAAATAACAA
Locus tag: RUMLAC_02581
Name: stpK Funciton: Mn2+-dependent serine/threonine protein kinase |
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stpK
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Mn2+-dependent serine/threonine protein kinase
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Position: -63
Score: 5.4 Sequence: GTGTTAAATTATTAACAA
Position: -37
Score: 4.9 Sequence: TTGACAATTTATTAACGA
Locus tag: RUMLAC_02580
Name: adhE Funciton: Alcohol dehydrogenase (EC 1.1.1.1), Fe-dependent; Acetaldehyde dehydrogenase (EC 1.2.1.10) |
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adhE
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Alcohol dehydrogenase (EC 1.1.1.1), Fe-dependent; Acetaldehyde dehydrogenase (EC 1.2.1.10)
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Position: -179
Score: 5.1 Sequence: TTGTGAAAAAATTATCAT
Locus tag: RUMLAC_01487
Name: por Funciton: Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-) |
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por
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Pyruvate-flavodoxin oxidoreductase (EC 1.2.7.-)
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Position: -61
Score: 4.9 Sequence: TTGATAAAAAATAGACAA
Locus tag: RUMLAC_02728
Name: pfkA Funciton: 6-phosphofructokinase (EC 2.7.1.11) |
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pfkA
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6-phosphofructokinase (EC 2.7.1.11)
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Position: -111
Score: 4.8 Sequence: TTGTTTGATAATTAACAA
Locus tag: RUMLAC_00224
Name: aroE Funciton: Shikimate/quinate 5-dehydrogenase I beta (EC 1.1.1.282)
Locus tag: RUMLAC_00223
Name: kefA Funciton: potassium efflux system KefA
Locus tag: RUMLAC_00222
Name: aroD Funciton: 3-dehydroquinate dehydratase I (EC 4.2.1.10) |
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aroE
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Shikimate/quinate 5-dehydrogenase I beta (EC 1.1.1.282)
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kefA
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potassium efflux system KefA
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aroD
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3-dehydroquinate dehydratase I (EC 4.2.1.10)
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Position: -67
Score: 4.7 Sequence: TTGTTAAAATAAAGACAT
Locus tag: RUMLAC_00614
Name: ladH Funciton: Lactaldehyde reductase (EC 1.1.1.77) |
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ladH
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Lactaldehyde reductase (EC 1.1.1.77)
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Position: -96
Score: 4.6 Sequence: TTGATGAATTCTTAACAA
Locus tag: RUMLAC_01918
Name: gap Funciton: NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12) |
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gap
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NAD-dependent glyceraldehyde-3-phosphate dehydrogenase (EC 1.2.1.12)
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Regulated Genes | [ Tab delimited format ] | DOWNLOAD |
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Regulatory Sites | [ FASTA format ] | DOWNLOAD |