Regulon of PdxR in Ruminococcus lactaris ATCC 29176

Properties
Regulator type:	Transcription factor
TF locus tag:	RUMLAC_01873
Regulator family:	GntR/MocR
Regulation mode:
Biological process:	Pyridoxine biosynthesis
Effector:	Pyridoxal-5-phosphate
Regulog:	PdxR - Clostridia-3
Statistics of regulated genes:
- Genes	3
- Operons	2
Visualization:
	Allows to visualize regulon content in the context of metabolic pathways

Built upon 21 sites [see more]

Member of regulog collections

By taxonomy - Clostridia-3
By trascription factor - PdxR
By TF family - GntR/MocR
By effector - Pyridoxal-5-phosphate
By pathway - Pyridoxine biosynthesis

Regulated operons
	Locus Tag	Name	Function
Position: -132 Score: 10.4 Sequence: TTCTGACCT-(15)-AATTGAATA-(8)-TAGTCACAA Locus tag: RUMLAC_01874 Name: pdxS Funciton: Pyridoxine biosynthesis glutamine amidotransferase, synthase subunit (EC 2.4.2.-) Locus tag: RUMLAC_01875 Name: pdxT Funciton: Pyridoxine biosynthesis glutamine amidotransferase, glutaminase subunit (EC 2.4.2.-)
	RUMLAC_01874	pdxS	Pyridoxine biosynthesis glutamine amidotransferase, synthase subunit (EC 2.4.2.-)
	RUMLAC_01875	pdxT	Pyridoxine biosynthesis glutamine amidotransferase, glutaminase subunit (EC 2.4.2.-)
Position: -93 Score: 8.8 Sequence: ATCTGACCT-(15)-AATTGACCA-(8)-GGTTCACAT Locus tag: RUMLAC_01106 Name: pdxU Funciton: Substrate-specific component PdxU of predicted pyridoxin-related ECF transporter
	RUMLAC_01106	pdxU	Substrate-specific component PdxU of predicted pyridoxin-related ECF transporter

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	Regulatory Sites	[ FASTA format ]	DOWNLOAD