Regulons of Mycobacterium sp. JLS

Allows to visualize regulome content in the context of metabolic pathways



Type	Regulator	Effector	Pathway	Operons	Sites
TF	AcnR	Citrate	Tricarboxylic acid cycle	2	2
TF	AmtR	GlnK-AMP, signal transduction protein	Nitrogen metabolism	2	3
TF	ArgR	Arginine	Arginine biosynthesis	1	1
TF	ArsR	Arsenite; Arsenate	Arsenic resistance	2	4
TF	BioQ	Biotin	Biotin biosynthesis	5	3
TF	BioQ	Biotin	Biotin biosynthesis	3	3
TF	EutR	Ethanolamine	Ethanolamine utilization	2	4
TF	HrcA	Heat shock	Heat shock response	4	5
TF	HspR	Heat shock	Heat shock response	4	5
TF	LexA	DNA damage	SOS response	7	8
TF	LldR	L-lactate	Lactate utilization	2	4
TF	LtbR		Leucine biosynthesis	2	4
TF	MSMEG_3264		Erythritol utilization; D-threitol utilization	2	3
TF	MSMEG_3606		D-threitol utilization	2	4
TF	MSMEG_4140		Metabolite transport	2	2
TF	Mce2R		Fatty acid metabolism	1	1
TF	MntR	Manganese ion, (Mn2+)	Manganese homeostasis	2	2
TF	NrdR	Deoxyribonucleotides	Deoxyribonucleotide biosynthesis	2	4
TF	NrtR	Adenosine diphosphate ribose	NAD biosynthesis	2	2
TF	PdxR3		Pyridoxine/pyridoxal homeostasis	1	1
TF	PhnF		Phosphonate utilization; 2-aminoethylphosphonate utilization	3	4
TF	RhaR	Rhamnose	Rhamnose utilization	1	1
TF	SutR	Sulfate	Sulfur metabolism	1	1
TF	Znr	Zinc ion, (Zn2+)	Zinc homeostasis	1	1
TF	Zur	Zinc ion, (Zn2+)	Zinc homeostasis	7	8
RNA	Cobalamin	Adenosylcobalamin	Cobalamin biosynthesis	3	1
RNA	Glycine	Glycine	Glycine metabolism	2	2
RNA	PyrR	PyrR	Pyrimidine metabolism	1	1
RNA	SAH_riboswitch	S-adenosylhomocysteine	Methionine metabolism	1	1
RNA	SAM-IV	S-adenosylmethionine	Sulfur metabolism	3	2
RNA	TPP	Thiamine pyrophosphate	Thiamine biosynthesis	3	3
RNA	ydaO-yuaA		Osmotic stress response; Cell wall metabolism	1	1
RNA	yybP-ykoY			2	2

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Collection of Manually Curated Inferences of Regulons in Prokaryotic Genomes -- version 3.2 --