Profile of regulator SoxR in Shewanellaceae

Properties
Regulator family:	MerR
Regulation mode:	repressor
Biological process:	Superoxide stress response
Effector:	Paraquat
Regulog:	SoxR - Shewanellaceae

Member of regulog collections

By taxonomy - Shewanellaceae
By trascription factor - SoxR
By TF family - MerR
By effector - Paraquat
By pathway - Superoxide stress response

Transcription factor binding sites

	Locus Tag	Name	Position	Score	Sequence
Shewanella denitrificans OS217
	Sden_2124	PF00903	-56	7.3	ACCTCAAGCTAACTTGAGGT
	Sden_2125	soxR	-116	7.3	ACCTCAAGTTAGCTTGAGGT
	Sden_0647	Sden_0647	-61	7	ACCTCAAGTTAGCTTGAGCT
Shewanella frigidimarina NCIMB 400
	Sfri_1566	PF00903	-57	7	ACCTCAAGTTAGCTTTAGGT
	Sfri_1565	soxR	-64	7	ACCTAAAGCTAACTTGAGGT
Shewanella amazonensis SB2B
	Sama_3348	PF11158	-62	6.2	ACCTCAAGTTGACTTGAAGT
	Sama_3347	soxR	-32	6.2	ACTTCAAGTCAACTTGAGGT
Shewanella loihica PV-4
	Shew_0422	PF11158	-65	5.7	ACCTCAAGTCGACTTGAAGT
	Shew_0423	soxR	-32	5.7	ACTTCAAGTCGACTTGAGGT
Shewanella piezotolerans WP3
	swp_2308	acrA	-69	6.7	ACCTCAAGTTAACTTGATGT
	swp_2307	soxR	-49	6	ATCTCAAGTTAACTTTAGAT
Shewanella woodyi ATCC 51908
	Swoo_3439	soxR	-113	4.4	AgtTaAAGTcgACTTtAaGT

Export
	Regulatory Sites	[ FASTA format ]	DOWNLOAD