Profile of regulator YdcR in Vibrionales
Properties
| Regulator family: |
GntR/MocR |
| Regulation mode: |
|
| Biological process: |
|
| Effector: |
|
| Regulog: |
YdcR - Vibrionales |
Member of regulog collections
Transcription factor binding sites
|
Locus Tag |
Name |
Position |
Score |
Sequence |
|
Photobacterium profundum SS9
|
|
PBPRA3588 |
COG0348 |
-145 |
5.5 |
CCTTGTTAGAGTAAT-(9)-GACTGTTATATAATC |
|
Vibrio cholerae O1 biovar eltor str. N16961
|
|
VCA0872 |
PF01654 |
-99 |
9.1 |
ATCTGTTCTATTTTT-(9)-AACTGTTCTAGTTCT |
|
Vibrio harveyi ATCC BAA-1116
|
|
VIBHAR_00402 |
COG0348 |
-228 |
7.3 |
AACTGTTCAGTCATT-(9)-AACTGTACTGACTTT |
|
VIBHAR_01895 |
null |
-95 |
7.3 |
AACTGTTTGATCTTT-(9)-AACTGTATCAGAAAC |
|
Vibrio parahaemolyticus RIMD 2210633
|
|
VP1894 |
null |
-34 |
6.6 |
AACTGTTTACCTATT-(9)-AACTGTATCAGTGAA |
|
VP3052 |
COG0348 |
-155 |
6.7 |
AACTGTTCAGCCGTT-(9)-AACTGTACTGACTTT |
|
VPA1137 |
PF01654 |
-100 |
8 |
ATCTGTTATAGGTTT-(9)-GTCTGTACCTACTTC |
|
Vibrio splendidus LGP32
|
|
VS_1690 |
PF01654 |
-112 |
9.2 |
ATCTGTTCTGTTTTT-(9)-ATCTGTTCTAGTTTG |
|
VS_3138 |
COG0348 |
-246 |
7.1 |
TTCTGTTCGCTATTT-(9)-AACTGTTATGACTTT |
|
VS_1813 |
null |
-92 |
5.5 |
AACTGTACGGACTGA-(9)-AACTGTACGCCTTCT |
|
Vibrio vulnificus CMCP6
|
|
VV1_1038 |
COG0348 |
-224 |
5.7 |
CACTGTTCAGCGAAA-(9)-AATTGTCCTGCTTTT |
|
VV1_2253 |
null |
-92 |
7.2 |
AACTGATTAGGGATT-(9)-AACTGTGCCTGTAGA |
Export
|
Regulatory Sites
|
[ FASTA format ]
|
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