Profile of regulator Nfa20840 in Nocardiaceae
Properties
| Regulator family: |
GntR/Others |
| Regulation mode: |
|
| Biological process: |
|
| Effector: |
|
| Regulog: |
Nfa20840 - Nocardiaceae |
Member of regulog collections
Transcription factor binding sites
|
Locus Tag |
Name |
Position |
Score |
Sequence |
|
Nocardia farcinica IFM 10152
|
|
nfa20830 |
Arth_3540 |
-209 |
5 |
CCGATGGTATACAACTGG |
|
Rhodococcus opacus B4
|
|
ROP_14220 |
Nfa20840 |
-318 |
3.5 |
GATGGTGTGAACATCCCG |
|
ROP_14230 |
Arth_3542-3 |
-56 |
4.8 |
TTTGTTGCATACAATATG |
|
ROP_14220 |
Nfa20840 |
-26 |
4.8 |
CATATTGTATGCAACAAA |
|
ROP_14220 |
Nfa20840 |
-37 |
4.3 |
ATTGGTGTATACATATTG |
|
ROP_14230 |
Arth_3542-3 |
-45 |
4.3 |
CAATATGTATACACCAAT |
|
ROP_14210 |
Arth_3540-2 |
-105 |
5.6 |
CGTCTTGTATACAGCAAG |
|
ROP_14200 |
Arth_3539 |
-114 |
5.6 |
CTTGCTGTATACAAGACG |
|
Rhodococcus sp. RHA1
|
|
RHA1_ro03015 |
Arth_3542-3 |
-42 |
4.7 |
CAATATGTATACACCACA |
|
RHA1_ro03017 |
Arth_3540-2 |
-106 |
5.6 |
CGTCTTGTATACAGCAAG |
|
RHA1_ro03015 |
Arth_3542-3 |
-53 |
4.3 |
TTTCCTGCATACAATATG |
|
RHA1_ro03016 |
Nfa20840 |
-8 |
4.3 |
CATATTGTATGCAGGAAA |
|
RHA1_ro03016 |
Nfa20840 |
-19 |
4.7 |
TGTGGTGTATACATATTG |
|
RHA1_ro03857 |
Arth_3540 |
-204 |
5.1 |
CCGGTCGTATACAACTGG |
|
RHA1_ro03018 |
Arth_3539 |
-114 |
5.6 |
CTTGCTGTATACAAGACG |
Export
|
Regulatory Sites
|
[ FASTA format ]
|
DOWNLOAD
|
