Profile of regulator SoxR in Rhizobiales
Properties
| Regulator family: |
MerR |
| Regulation mode: |
activator (repressor) |
| Biological process: |
Superoxide stress response |
| Effector: |
Paraquat |
| Regulog: |
SoxR - Rhizobiales |
Member of regulog collections
Transcription factor binding sites
|
Locus Tag |
Name |
Position |
Score |
Sequence |
|
Sinorhizobium meliloti 1021
|
|
SMc03095 |
null |
-59 |
6.2 |
ACCTCAAGTACGGTTGAGGT |
|
SMc00183 |
PF03358 |
-67 |
6.5 |
ACCTCAACTATAGTTGAGGT |
|
SMc01217 |
PF07690 |
-62 |
5.7 |
ACCTCAACCGCGATTGAGGT |
|
SMc00182 |
soxR |
-31 |
6.5 |
ACCTCAACTATAGTTGAGGT |
|
Rhizobium sp. NGR234
|
|
NGR_c15730 |
PF07690 |
-63 |
5.7 |
ACCTCAAGAGCGCTTGAGGT |
|
NGR_c16770 |
PF03358 |
-68 |
6.5 |
ACCTCAACTAAGCTTGAGGT |
|
NGR_c16780 |
soxR |
-31 |
6.5 |
ACCTCAAGCTTAGTTGAGGT |
|
Rhizobium leguminosarum bv. viciae 3841
|
|
RL3412 |
PF03992 |
-63 |
6 |
ACCTCAGGTTAACTTGAGGA |
|
RL4165 |
PF00903 |
-69 |
6 |
ACCTCAACCGATGTTGAGGT |
|
RL4398 |
PF03358 |
-74 |
6.3 |
ACCTCAAGATTAGTTGAGGT |
|
RL4397 |
soxR |
-29 |
6.3 |
ACCTCAACTAATCTTGAGGT |
|
Rhizobium etli CFN 42
|
|
RHE_CH02961 |
PF03992 |
-60 |
6 |
ACCTCAACCATAGTTGAGGA |
|
RHE_CH03863 |
soxR |
-29 |
6 |
ACCTCAACTAATATTGAGGT |
|
Agrobacterium tumefaciens str. C58 (Cereon)
|
|
Atu2361 |
PF07690 |
-56 |
6 |
ACCTCAACTATGGTTGAGGA |
|
Atu0942 |
PF07690 |
-78 |
5.3 |
ACCTCAATGGCGCTTGAGGT |
|
Atu4583 |
sodB |
-96 |
5.8 |
ACCTCAACCGTGATTGAGGT |
|
Atu3915 |
soxR |
-91 |
6.1 |
ACCTCAACTATAGTTGAGGA |
|
Mesorhizobium loti MAFF303099
|
|
mlr3125 |
PF07690 |
-161 |
5.6 |
AGCTCAACCGCGGTTGAGGT |
|
mlr7819 |
PF03992 |
-75 |
6.3 |
ACCTCAACTTAAGTTGAGAT |
|
mlr2720 |
soxR |
-37 |
6 |
AGCTCAACATAACTTGAGGT |
|
Xanthobacter autotrophicus Py2
|
|
Xaut_1054 |
null |
-145 |
5.6 |
ACCTAAACCATACTCGAGGT |
|
Xaut_1053 |
soxR |
26 |
5.6 |
ACCTCGAGTATGGTTTAGGT |
Export
|
Regulatory Sites
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[ FASTA format ]
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